GEO Browser - GEO

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1206 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			NARROWPEAK
GSE30401	AlleleSeq: Analysis of Allele-Specific Expression and Binding in a Network Framework	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM NARROWPEAK TAGALIGN	Joel Rozowsky	Jul 09, 2011
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE55581	Diet-induced chromatin remodeling in mice livers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BED BEDPE DIFF NARROWPEAK SRA Run Selector	Amy Leung	Jul 17, 2014
GSE65159	Conserved epigenomic signatures between mouse and human elucidate immune basis of Alzheimer's disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW NARROWPEAK TXT SRA Run Selector	Andreas R Pfenning	Feb 18, 2015
GSE60731	Regulation of chromatin accessibility and Zic binding at enhancers in the developing cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	63	BED NARROWPEAK TXT SRA Run Selector	Christopher L Frank	Feb 27, 2015
GSE65698	Pluripotent mouse Embryonic Stem Cells and during Retinoic Acid-induced differentiation	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	NARROWPEAK	Michal Stachowiak	May 01, 2015
GSE67458	The MEF2B Regulatory Network	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	55	CEL NARROWPEAK TXT	Patrick Plettner	Jul 01, 2015
GSE66961	Identification of in vivo DNA-binding mechanisms of Pax6 and reconstruction of Pax6-dependent gene regulatory networks during lens and forebrain development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	24	BED NARROWPEAK TXT SRA Run Selector	Shira Rockowitz	Jul 09, 2015
GSE56312	Ground state conditions induce rapid reorganization of core pluripotency factor binding that precede global epigenetic reprogramming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	NARROWPEAK TDF SRA Run Selector	Michael Johannes Ziller	Aug 05, 2015
GSE71667	Regional centromeres in Candida lusitaniae lack pericentromeric heterochromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Clavispora lusitaniae	10	NARROWPEAK TXT	Lisha Zhu	Sep 14, 2015
GSE67382	BAF controls genome accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Douglas Porter	Nov 12, 2015
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE72173	Genome-wide studies reveal novel biological pathways regulated by SIN3 isoforms	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	14	BED BEDGRAPH NARROWPEAK	Lori Ann Pile	Jan 09, 2016
GSE75356	A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by array	Danio rerio Homo sapiens	48	BW NARROWPEAK	Leonard Zon	Feb 01, 2016
GSE76935	Suppression of SWI/SNF component Arid1a promotes mammalian regeneration through chromatin remodeling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BIGWIG BROADPEAK NARROWPEAK XLS	Xuxu Sun	Mar 30, 2016
GSE64328	Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BED CEL NARROWPEAK	Luca Petiti	Apr 04, 2016
GSE71131	The dynamic regulatory genome of Capsaspora owczarzaki and the origin of animal multicellularity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Capsaspora owczarzaki	33	BED BEDGRAPH BROADPEAK NARROWPEAK TXT SRA Run Selector	Arnau Sebe-Pedros	Apr 12, 2016
GSE65520	Dynamic regulation of the histone variant H1.0 contributes to intratumor epigenetic and functional heterogeneity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	BED BROADPEAK NARROWPEAK	Paola Scaffidi	May 01, 2016
GSE77845	TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	NARROWPEAK	Viviana Piccolo	May 04, 2016
GSE61971	Molecular profiling of mouse Dnmt3a/FLT3-ITD leukemia models	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT	Margaret Goodell	May 19, 2016