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450 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			GFF
GSE96916	Transcriptomic analysis of the response of Acropora millepora to hypo-osmotic stress provides insights into DMSP biosynthesis by corals	Expression profiling by high throughput sequencing	Acropora millepora	45	CSV FASTA GFF TXT SRA Run Selector	Catalina Aguilar	Aug 20, 2017
GSE87792	A mutually exclusive stem loop arrangement in roX2 RNA is essential for X chromosome regulation in Drosophila	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	BED BIGWIG BW GFF NARROWPEAK SRA Run Selector	Asifa Akhtar	Oct 01, 2017
GSE89276	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [XL1 DHX9 FLASH CLIP-seq]	Expression profiling by high throughput sequencing	Homo sapiens	6	BED BIGWIG GFF SRA Run Selector	Asifa Akhtar	Mar 28, 2017
GSE73009	Conservation and modification of genetic and physiological toolkits underpinning diapause in bumble bee queens	Expression profiling by high throughput sequencing	Bombus terrestris	25	GFF TXT SRA Run Selector	Etya Amsalem	Oct 01, 2015
GSE92859	Transcript profiling of sugar beet colonized by Rhizoctonia solani, the crown and root rot pathogen	Expression profiling by high throughput sequencing	Beta vulgaris	36	CSV FA GFF SRA Run Selector	Louise Sara Andersson	Dec 22, 2017
GSE205998	Apilactobacillus kunkeei releases RNA-associated membrane vesicles and proteinaceous nanoparticles	Expression profiling by high throughput sequencing	Apilactobacillus kunkeei	6	CSV GFF	Siv Andersson	Jun 09, 2023
GSE83417	Pol II and CTD Phosphorylation of ATP-analog sensitive Kin28 budding yeast	Genome binding/occupancy profiling by genome tiling array Expression profiling by high throughput sequencing	Saccharomyces cerevisiae Saccharomyces cerevisiae BY4741	54	FTR GFF TIFF	Aseem Ansari	Jun 16, 2016
GSE107166	Chromatin immunoprecipitation and expression analysis in WT and hrr25 mutant cells	Genome binding/occupancy profiling by genome tiling array Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	30	FTR GFF	Aseem Ansari	Dec 02, 2018
GSE179570	CRISPRi screen for a-amylase yield improvements in Bacillus subtilis	Expression profiling by high throughput sequencing	Bacillus subtilis subsp. subtilis str. 168	8	FNA GFF TSV SRA Run Selector	Christian Anthon	Feb 22, 2023
GSE189556	Transcriptomic impact of PrsA over-expression during fed-batch Bacillus subtilis alpha-amylase fermentation	Expression profiling by high throughput sequencing	Bacillus subtilis subsp. subtilis str. 168	41	BED FNA GFF TSV SRA Run Selector	Christian Anthon	Jul 06, 2022
GSE108941	Infection of RoNi cells with Sendai Cantell virus at MOI of 1.0	Expression profiling by high throughput sequencing	Rousettus aegyptiacus	18	GFF H5 SRA Run Selector	Catherine E Arnold	Apr 26, 2018
GSE117367	Infection of RoNi cells with Sendai Cantell virus, MARV371bat virus, and VP35 mutant MARV371bat-R301A virus at MOI of 1.0	Expression profiling by high throughput sequencing	Rousettus aegyptiacus	36	GFF H5 SRA Run Selector	Catherine E Arnold	Nov 01, 2018
GSE198534	Genetic and transcriptomic characteristics of RhlR-dependent quorum sensing in cystic fibrosis isolates of Pseudomonas aeruginosa: isolate E104	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa	6	FAA FNA GFF GTF TXT XLS	Kyle Lowe Asfahl	Mar 18, 2022
GSE198716	Genetic and transcriptomic characteristics of RhlR-dependent quorum sensing in cystic fibrosis isolates of Pseudomonas aeruginosa: isolate E113	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa	6	FAA FNA GFF GTF TXT	Kyle Lowe Asfahl	Mar 18, 2022
GSE198717	Genetic and transcriptomic characteristics of RhlR-dependent quorum sensing in cystic fibrosis isolates of Pseudomonas aeruginosa: isolate E125	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa	6	FAA GFF GTF TXT	Kyle Lowe Asfahl	Mar 18, 2022
GSE198718	Genetic and transcriptomic characteristics of RhlR-dependent quorum sensing in cystic fibrosis isolates of Pseudomonas aeruginosa: isolate E131	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa	6	FAA FNA GFF GTF TXT XLS	Kyle Lowe Asfahl	Mar 18, 2022
GSE198719	Genetic and transcriptomic characteristics of RhlR-dependent quorum sensing in cystic fibrosis isolates of Pseudomonas aeruginosa: isolate E167	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa	6	FAA FNA GFF GTF TXT XLS	Kyle Lowe Asfahl	Mar 18, 2022
GSE83219	DUAL RNASeq ANALYSIS REVEALS AN INCREASE OF FUNGAL PATHOGENICITY FUNCTIONS AND A ROLE OF PLANT GLUTAMINE SYNTHETASE IN NITROGEN-INDUCED SUSCEPTIBILITY TO THE RICE BLAST FUNGUS	Expression profiling by high throughput sequencing	Oryza sativa Pyricularia oryzae	24	GFF TXT SRA Run Selector	Elsa Ballini	Oct 31, 2016
GSE66185	The Nucleosome Landscape of P. falciparum Reveals Chromatin Architecture and Dynamics of Regulatory Sequences	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	20	BEDGRAPH GFF TSV SRA Run Selector	Richard Csaba Bartfai	Nov 25, 2015
GSE125467	The role of (p)ppGpp in the heat shock response in B. subtilis	Expression profiling by high throughput sequencing	Bacillus subtilis	32	CSV FNA GFF RPKM TAB SRA Run Selector	Michael Beckstette	Apr 15, 2019