GEO Browser - GEO

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69 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing			TBI
GSE161132	Decoding Cortical Glial Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 MTX TBI TSV SRA Run Selector	Guoping Liu	Feb 05, 2021
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE189210	Parallel single cell multi-omics analysis of neonatal skin reveals transitional fibroblast states that restrict differentiation into distinct fates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED CSV H5 MTX TBI TSV SRA Run Selector	Sean Thompson	Nov 24, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE190795	IL-9 is required for multi-cytokine producing tissue-resident memory CD4+ T cell-dependent allergic airway recall responses	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	CSV H5 TBI TSV SRA Run Selector	Rakshin Kharwadkar	Jan 31, 2022
GSE183310	Decoding the PITX2 controlled genetic network in atrial fibrillation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV H5 MTX TBI TSV TXT SRA Run Selector	Jeffrey D. Steimle	Apr 28, 2022
GSE188670	Divergent clonal differentiation trajectories of T cell exhaustion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	CSV TBI TSV	Ansuman T Satpathy	Jul 25, 2022
GSE198730	Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED CSV H5 HIC MTX TBI TSV XLSX	Vittorio Sartorelli	Jul 31, 2022
GSE174405	A novel lineage of RORγt+ antigen presenting cells instructs microbiota-dependent regulatory T cell differentiation and tolerance during early life	Expression profiling by high throughput sequencing	Mus musculus	515	TBI TSV	Chrysothemis Brown	Sep 06, 2022
GSE199565	Longitudinal single cell transcriptional and epigenetic mapping of effector, memory, and exhausted CD8 T cells reveals shared biological circuits across distinct cell fates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	CSV H5 MTX TBI TSV	E JOHN WHERRY	Oct 31, 2022
GSE179043	Transcriptional programs dictating Schwann cell transformation in MPNST	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	50	CSV H5 TAR TBI TSV TXT	Lai Man (Natalie) Wu	Nov 07, 2022
GSE209610	Lineage tracing and single nuclear multiomics reveal novel features of adaptive and maladaptive repair after acute kidney injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	H5 TBI TSV	Kari Ann Koppitch	Nov 22, 2022
GSE204952	Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW TBI TSV ZIP	Anthony Oro	Mar 28, 2023
GSE229892	Paired single nucleus RNA and ATAC sequencing on the role of diet and aging in hematopoietic stem and progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TAR TBI TSV	Pura Muñoz-Cánoves	Apr 21, 2023
GSE230363	Longitudinal single cell transcriptional and epigenetic mapping of effector, memory, and exhausted CD8 T cells reveals shared biological circuits across distinct cell fates [scRNA-seq and scATAC-seq coAssay]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED H5 MTX TBI TSV	E JOHN WHERRY	May 31, 2023
GSE225566	Direct androgen receptor regulation of sexually dimorphic gene expression in the mammalian kidney	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	H5 TBI TSV	Andrew P McMahon	Aug 02, 2023
GSE222373	TBX5 KO multiome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV H5 TBI TSV	William T. Pu	Aug 11, 2023
GSE222970	Tbx5 maintains atrial identity by regulating an atrial enhancer network	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED BW CSV H5 TBI TSV TXT	William T. Pu	Aug 11, 2023
GSE237408	Developmental programming of Kupffer cells by maternal obesity causes fatty liver disease in the offspring	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	TBI TSV	Elvira Mass	Aug 22, 2023
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023