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12 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing				MCOOL
GSE131784	Spen regulates X chromosome inactivation	Expression profiling by high throughput sequencing Other	Mus musculus	73		BW MCOOL TXT	samuel Collombet	Dec 08, 2019
GSE178348	TCF-1 mediates 3D genome reconfiguration during T cell development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	40		BED BW HIC MCOOL TXT	Wenliang Wang	Feb 24, 2022
GSE178982	Enhancer-promoter interactions and transcription are maintained upon acute loss of CTCF, cohesin, WAPL, and YY1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	173		BW MCOOL SRA Run Selector	Xavier Darzacq	Jul 15, 2021
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	107		BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE191312	multi-omic analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11		BW CSV MCOOL MTX TSV	John James Tello-Cajiao	Apr 01, 2022
GSE198181	A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [Micro-C]	Expression profiling by high throughput sequencing	Mus musculus	2		MCOOL	Maximilian Christian von der Linde	Jan 20, 2023
GSE215453	SINE-MIR enhancer rewiring by Esrrb architecturally reprogram the pluripotency spectrum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78		BW MCOOL MTX TSV	Yingying Zeng	Mar 31, 2025
GSE232194	Olfactory receptor mRNAs act as selfish non-coding RNAs that enforce transcriptional singularity (Non-coding OR Hi-C & RNA-seq)	Expression profiling by high throughput sequencing Other	Mus musculus	41		MCOOL TXT	Ariel Pourmorady	Sep 28, 2023
GSE234295	Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	124		MCOOL WIG	Dirk Schuebeler	Mar 11, 2024
GSE250307	Decoding the determinants of genome-nuclear lamina interactions by a random scrambling approach	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	320		BW MCOOL	Bas van Steensel	Dec 19, 2023
GSE266750	GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	75		BED BIGWIG MCOOL TXT	Feng Yue	Dec 19, 2024
GSE278946	PRC1 and CTCF-Mediated Transition from Poised to Active Chromatin Loops Drives Bivalent Gene Activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	33		BW COOL MCOOL XLSX	Zhonghua Gao	Jan 28, 2025