GEO Browser - GEO

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29 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing			COV
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE134636	Developmental Dieldrin Exposure Alters DNA Methylation at Genes Related to Dopaminergic Neuron Development and Parkinson’s Disease in Mouse Midbrain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	58	COV H5 TXT XLS SRA Run Selector	Alison I Bernstein	Jul 23, 2019
GSE140125	DeepH&M: Simultaneous determination of single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	24	COV TXT SRA Run Selector	Daofeng Li	Sep 10, 2020
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE157556	Insights into the regulation of the brain-placental axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	42	COV NARROWPEAK	Susanta K. Behura	Aug 27, 2021
GSE159043	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BROADPEAK BW COV	Falong Lu	Jun 27, 2022
GSE164783	Epigenetic abnormality due to maternal Zika virus infection	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	COV TAR	Guoping Fan	Jun 30, 2021
GSE165079	ZFP57 dictates allelic expression switch of target imprinted genes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	COV TXT SRA Run Selector	weijun jiang	Jan 27, 2021
GSE168728	Mouse totipotent stem cells captured and maintained through spliceosomal repression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	50	COV CSV NARROWPEAK SRA Run Selector	Min Yang	May 15, 2021
GSE179880	Unveiling E2F4, TEAD1 and AP-1 as regulatory transcription factors of the replicative senescence program by multi-omics analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	COV NARROWPEAK TXT SRA Run Selector	Yi Zhang	Oct 01, 2021
GSE186260	The chemical reprogramming of unipotent adult germ cells towards authentic pluripotency and de novo establishment of imprinting	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	145	COV CSV TXT XLSX SRA Run Selector	Jiansen Lu	Feb 07, 2023
GSE186315	Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	57	COV TSV SRA Run Selector	Quentin Gouil	Oct 24, 2021
GSE188158	The major urinary protein gene cluster knockout mouse as a novel model for translational metabolism research	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	47	COV TXT	Adhideb Ghosh	Aug 01, 2022
GSE190402	The distinct effects of MEK and GSK3 inhibition upon the DNA methylome and transcriptome of mouse embryonic stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	COV TXT SRA Run Selector	Felix Krueger	Dec 14, 2021
GSE195556	An engineered Sox17 induces somatic to neural stem cell fate transition independently from pluripotency reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	COV MTX TSV	Mingxi WENG	Jul 19, 2023
GSE206450	TET proteins regulate T cell and iNKT cell lineage specification in a TET2 catalytic dependent manner.	Other Expression profiling by high throughput sequencing	Mus musculus	21	BIGWIG COV TAB TXT	Tarmo Äijö	Jul 15, 2022
GSE210026	Transcriptional and epigenetic reprogramming mediated by chronic IL1β exposure drives self-renewal ability and myeloid priming in TET2 deficient stem and progenitor cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	64	COV	Anupriya Agarwal	Oct 27, 2023
GSE210806	Single-cell triple-omics uncovers DNA methylation as key feature of stemness in the healthy and ischemic adult brain	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	4532	BEDGRAPH COV	Ana Martin-Villalba	Aug 12, 2022
GSE224447	DNA methylation and gene expression changes in mice induced by parabiosis and recovery	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by array	Homo sapiens Macaca mulatta Mus musculus Rattus Rattus norvegicus	233	COV IDAT TXT	Jesse Poganik	Apr 21, 2023
GSE226209	Durable and efficient gene silencing in vivo by hit-and-run epigenome editing	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	121	COV TXT	Sara Valsoni	Dec 20, 2023