GEO Browser - GEO

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889 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing			BW
GSE202585	Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	unidentified plasmid Mus musculus	38	BW	Ioanna Tiniakou	Apr 12, 2024
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Mus musculus	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE215065	Regulation of mouse chamber selective enhancers	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	synthetic construct Mus musculus	82	BW TXT	Xiaoran Zhang	Jan 30, 2023
GSE218472	Enhancer grammar of liver cell types and hepatocyte zonation states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	79	BW TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023
GSE237089	Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types.	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Mus musculus	108	BW CSV	Mati Tesfaye Nemera	Jan 31, 2025
GSE267849	Fosl2 facilitates chromatin accessibility to determine developmental events during follicular maturation [RNA-seq]	Expression profiling by high throughput sequencing	Sus scrofa Mus musculus	17	BW	Yiting Guan	Jun 01, 2024
GSE267974	Fosl2 facilitates chromatin accessibility to determine developmental events during follicular maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Sus scrofa Mus musculus	48	BW MTX TSV	Yiting Guan	Jun 01, 2024
GSE219071	mDRIP-seq is a high-throughput method for quantitative R-loop landscape profiling	Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae Oryza sativa Mus musculus Homo sapiens Escherichia coli Arabidopsis thaliana	384	BW TXT	Changbin Sun	Jun 11, 2024
GSE250094	De novo Assembly and Delivery of Synthetic Megabase-Scale Human DNA into Mouse Early Embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Saccharomyces cerevisiae Mus musculus	38	BW FA GTF TDF TXT	Yue Liu	Apr 16, 2025
GSE154063	Transcriptome profile of ENDOC-BH1 cells and isolated murine islets modulating TFEB expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus Mus musculus Homo sapiens	74	BW TXT	Rossella De Cegli	Jul 31, 2023
GSE190906	Synthetic genomic reconstitution reveals principles of mammalian Hox cluster regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus	162	BW	Sudarshan Pinglay	Dec 16, 2021
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus Nomascus leucogenys Mus pahari Mus musculus Mus caroli Macaca mulatta Hylobates moloch Homo sapiens	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE198250	High depth profiling of miRNA targets with chimeric eCLIP [eCLIPseq]	Expression profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus Homo sapiens	188	BED BW TSV	Gene Yeo	Jul 30, 2022
GSE198251	High depth profiling of miRNA targets with chimeric eCLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus Homo sapiens	204	BED BW TSV	Gene Yeo	Jul 29, 2022
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE253257	Neural zinc finger protein Myt1 drives oligodendrocyte differentiation via repressing HDAC1-mediated histone deacetylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus Mus musculus	13	BW	敏溪方	Oct 01, 2024
GSE75005	Role of the histone demethylase Kdm6b/Jmjd3 in somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	BED BW	Andrew P Hutchins	Jul 22, 2020
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Homo sapiens	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE98101	Spatial-temporal epigenetic landscape of mouse gastrula	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	120	BW TAGALIGN TXT XLS SRA Run Selector	Naihe Jing	Oct 07, 2019
GSE108963	Single-cell transcriptomic analysis reveals lineage hierarcies and communications for second heart lineage deployment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BW TXT	Haiqing Xiong	Jun 22, 2019