GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Expression profiling by high throughput sequencing			BED
GSE103247	Qki5 CLIP in E14.5 mouse brain	Expression profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH SRA Run Selector	Masato Yano	Dec 08, 2017
GSE151747	eiCLIP analysis of RBFOX2 in primary mouse hepatocytes	Expression profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH SRA Run Selector	LMS Bioinformatics Core	Sep 26, 2022
GSE73225	SOX9 modulates the expression of key transcription factors required for heart valve development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	5	BED TXT SRA Run Selector	Pamela A. Hoodless	Nov 05, 2015
GSE62050	High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq using drop-based microfluidics	Expression profiling by high throughput sequencing	Mus musculus	6	BED TXT SRA Run Selector	oren ram	Jun 05, 2015
GSE44935	The Role of Tet1 During Somatic Cell Reprogramming	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	7	BED TXT SRA Run Selector	Lihui Lin	Mar 08, 2013
GSE103248	RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain	Expression profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH TXT	Masato Yano	Dec 08, 2017
GSE131154	Fidelity of translation initiation is required for coordinated respiratory complex assembly	Expression profiling by high throughput sequencing Other	Mus musculus	8	BED WIG SRA Run Selector	Stefan J Siira	Jan 13, 2020
GSE160325	Identification of LARP1 targets in naive CD4 T cells [eCLIP]	Expression profiling by high throughput sequencing	Mus musculus	12	BED BEDGRAPH SRA Run Selector	Alison Galloway	May 13, 2021
GSE118121	Chemical nucleoside conversion-based measurement of RNA stability by targeted and untargeted mRNA 3´ end sequencing	Expression profiling by high throughput sequencing	Mus musculus	14	BED FA TSV SRA Run Selector	Brian Reichholf	Dec 31, 2019
GSE109545	A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED COV CSV SRA Run Selector	Myriam Hemberger	May 02, 2018
GSE173403	Allele-specific differential regulation of monoallelically expressed autosomal genes in the cardiac lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED CSV	Gayan Indhu Balasooriya	Aug 22, 2022
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE252839	Nuclear Factor NFAT5 Governs Cellular Plasticity-Induced KRAS-Targeted Therapy Resistance in Pancreatic Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED BW CSV MTX TSV TXT	Pingping Hou	Oct 09, 2024
GSE66092	PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	32	BED BEDGRAPH TXT SRA Run Selector	Hun-Way Hwang	Feb 19, 2016
GSE242974	The role of SMC3 in heart development by regulating super-enhancer associated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BED BEDGRAPH BW MTX TSV XLS XLSX	bowen zhang	Sep 14, 2023
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE85731	Epigenetic memory of obesity in mouse colonic epithelium	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	45	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Dec 19, 2017
GSE160328	RNMT regulates the CD4 T cell transcriptome and translatome	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	46	BED BEDGRAPH TAB	Alison Galloway	May 13, 2021
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012