GEO Browser - GEO

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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Third-party reanalysis	Mus musculus
GSE202285	Downstream targets of Isl1 in the hindlimb field and genital tubercle	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Alligator mississippiensis Anolis sagrei Gallus gallus Mus musculus Trachemys scripta	76	BED BW NARROWPEAK TXT	Douglas Menke	Apr 04, 2025
GSE183739	Maternal Smchd1 regulates Hox gene expression and patterning in the mouse embryo [H2AK119ub CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Drosophila melanogaster Mus musculus	28	TXT SRA Run Selector	Natalia Benetti	Jun 27, 2022
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Gallus gallus Mus musculus	19	BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE156074	High dimensional association detection in large-scale genomic data	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Mus musculus	8	BED BW TXT SRA Run Selector	Ross Hardison	Nov 18, 2020
GSE232216	Light-Assisted Single-Stranded Open-Chromatin Analysis in K562 and Spatially Localized Neuronal Single Cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Third-party reanalysis Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	445	BED	Junhyong Kim	Oct 19, 2023
GSE101397	Rapid chromatin switch in the direct reprogramming of fibroblasts to neurons	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	41	TXT SRA Run Selector	Qian Yi Lee	Sep 25, 2017
GSE112110	Genome wide map of DMC1 in testis of Stag3-/-, Rec8-/- and Stag3-/-Rec8-/- mice.	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	14	BED BEDGRAPH TXT SRA Run Selector	Mary Ann Handel	Mar 07, 2019
GSE117081	The Transcription factor Zeb2 ia required to maintain tissue-specific identities of macrophages	Expression profiling by array Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	52	CEL TXT	Liesbet Martens	Jul 14, 2018
GSE129156	Genome-wide maps of H3K9me3 in hematopoietic stem cells from Kdm4a, b, c triple knockout mice	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	2	XLSX SRA Run Selector	Karl Agger	Apr 02, 2019
GSE129157	The KDM4/JMJD2 histone demethylases are required for hematopoietic stem cell maintenance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	10	TXT	Karl Agger	Apr 02, 2019
GSE129886	Antibiotics treatment ameliorates TET2 loss-of-function associated hematological malignancies	Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	12	TXT SRA Run Selector	Jia Li	Apr 01, 2021
GSE135790	Stellate cells, hepatocytes and endothelial cells imprint the Kupffer cell identity on monocytes colonizing the liver macrophage niche	Expression profiling by array Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	72	CEL TXT	Liesbet Martens	Aug 14, 2019
GSE144144	Sexual dimorphism in the meiotic requirement for PRDM9: a mammalian evolutionary safeguard	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Other	Mus musculus	7	BED BEDGRAPH TXT SRA Run Selector	Natalie R Powers	Oct 23, 2020
GSE144708	Distinct signature, origin and dynamics of macrophages in the peripheral and central nervous system	Expression profiling by high throughput sequencing Expression profiling by array Third-party reanalysis	Mus musculus	41	CEL TXT	Liesbet Martens	Feb 04, 2020
GSE159503	Effects of sheared chromatin length on ChIP-seq quality and sensitivity	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	65	BROADPEAK BW XLSX SRA Run Selector	Ross Hardison	Oct 14, 2020
GSE160918	Transcriptomic analysis of cardiomyocyte upon OSKM induction	Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	8	TXT SRA Run Selector	Stefan Günther	Sep 24, 2021
GSE165495	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	23	BW COOL NARROWPEAK TAR TXT	Lucille Lopez-Delisle	Jul 20, 2021
GSE178288	Roles of Runx2 in chromatin landscape in skeletal development [RNA-Seq]	Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	10	XLSX SRA Run Selector	Hironori Hojo	Sep 06, 2022
GSE183737	Maternal Smchd1 regulates Hox gene expression and patterning in the mouse embryo [H3K27me3 CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	31	TXT SRA Run Selector	Natalia Benetti	Jun 27, 2022
GSE183740	Maternal Smchd1 regulates Hox gene expression and patterning in the mouse embryo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Methylation profiling by high throughput sequencing	Mus musculus	179		Natalia Benetti	Jun 27, 2022