GEO Browser - GEO

Series

Samples

Platforms

DataSets

66 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by high throughput sequencing	Homo sapiens		BW
GSE249786	Mitochondrial RNA-seq and total RNA-seq of 293T, HeLa, and N2a cells; RIP-seq of SUPV3L1, ceSUPV3L1, ATP5B, and TRAP1; Small RNA-seq of 293T mitochondrial fractions	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Caenorhabditis elegans Homo sapiens Mus musculus	36	BW CSV TXT	Xu Liu	Dec 19, 2023
GSE241893	Differences in syncytia formation by SARS-CoV-2 variants modify host chromatin accessibility and cellular senescence via TP53	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Chlorocebus sabaeus Homo sapiens	146	BW SF TXT	Jonathan David Lee	Sep 30, 2023
GSE70408	PAF1, a molecular regulator of promoter-proximal pausing by RNA Polymerase II	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	61	BW SRA Run Selector	Ali Shilatifard	Aug 13, 2015
GSE33092	Oncogenic BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration [HT-seq]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	4	BW GTF SRA Run Selector	Douglas Porter	Apr 28, 2012
GSE37169	Oncogenic BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by array	Homo sapiens	7	BW CEL GTF	Douglas Porter	Apr 28, 2012
GSE55169	Pervasive genomic transcription during oxidative stress generates thousands of previously uncharacterized lncRNAs (RNA-Seq)	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	12	BW SRA Run Selector	Jingxian Zhang	May 27, 2015
GSE55172	Pervasive genomic transcription during oxidative stress generates thousands of previously uncharacterized lncRNAs	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	21	BEDGRAPH BW	Jingxian Zhang	May 27, 2015
GSE56152	RNA-seq and small RNA-seq from WT and ADAR1 knockdown H9 lines and their differentiation to specific types of neurons	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	24	BW TXT SRA Run Selector	Li Yang	Mar 23, 2015
GSE58161	Suppression of progenitor differentiation requires the long noncoding RNA ANCR	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	14	BW CEL	Douglas Porter	Jun 02, 2014
GSE58838	Microprocessor mediates transcription termination in long noncoding microRNA genes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	10	BW SRA Run Selector	Nicholas Proudfoot	Mar 02, 2015
GSE59840	Dissecting non-coding and pathogen RNA-protein interactomes	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	2	BW SRA Run Selector	Ryan Alexander Flynn	Nov 18, 2014
GSE68108	Genome wide mapping of long noncoding (lnc) RNAs in hepatic stellate cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	22	BW SRA Run Selector	Chan Zhou	Mar 23, 2016
GSE69446	Impact of NOD2 Genotype on the Innate Monocyte Transcriptome in Crohn’s Disease	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	28	BW SRA Run Selector	Yun Chen	Feb 15, 2017
GSE71315	Single cell analysis of long non-coding RNAs in the developing human neocortex	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	242	BW GTF TXT SRA Run Selector	John Liu	Mar 28, 2016
GSE82336	Perlman syndrome nuclease DIS3L2 controls cytoplasmic non-coding RNAs and provides surveillance pathway for maturing snRNAs	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	12	BW TXT SRA Run Selector	Tomasz M. Kuliński	Jul 19, 2016
GSE83968	The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens	39	BEDGRAPH BW SRA Run Selector	Ning Qing Liu	Feb 15, 2017
GSE84355	Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	8	BW	Jim Hughes	Aug 10, 2017
GSE85082	Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [RNA-Seq PROLIF-SEN]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	4	BW SRA Run Selector	Estelle Nicolas	Nov 28, 2017
GSE85083	Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [RNA-Seq siRNA H2A.Z]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	4	BW SRA Run Selector	Estelle Nicolas	Nov 28, 2017
GSE85085	Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	14	BW	Estelle Nicolas	Nov 28, 2017