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35 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Non-coding RNA profiling by high throughput sequencing	Mus musculus		CSV
GSE98417	Enhanced neuronal regeneration in the CAST/Ei mouse strain is linked to expression of differentiation markers after injury	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	530	CSV	Kenneth S. Kosik	Aug 01, 2017
GSE104850	Interrogating the functions of PRDM9 domains in meiosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	28	BED BIGWIG CSV SRA Run Selector	Galina Petukhova	Apr 27, 2018
GSE118341	Multi Omics analysis of fibrotic kidneys in two mouse models	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Protein profiling by Mass Spec	Mus musculus	50	CSV GTF TXT	Lorena Pantano	May 07, 2019
GSE118814	MicroRNA-7 regulates the plasticity of the enteroendocrine lineage	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	49	CSV MTX TSV SRA Run Selector	Praveen Sethupathy	Feb 24, 2020
GSE142677	AGO HITS-CLIP Reveals Distinct Patterns of miRNA Regulation of Visceral and Brown Adipose Tissue Identity	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	35	BEDGRAPH CSV SRA Run Selector	Sean O'Connor	Dec 28, 2019
GSE145051	Reproductive tract extracellular vesicles are sufficient to transmit intergenerational stress and program neurodevelopment	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	132	CSV SRA Run Selector	Jennifer Chan	Feb 11, 2020
GSE161071	cAMP and mGluR1/5 dependent expression of mRNA, lncRNA, and miRNA in mouse hippocampal neurons	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	32	CSV SRA Run Selector	Sathyanarayanan V Puthanveettil	Nov 07, 2022
GSE178826	Multi-omic analysis defines the first microRNA atlas across all small intestinal epithelial lineages and reveals microRNA markers of almost all major cell types	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	36	CSV MTX TSV SRA Run Selector	Praveen Sethupathy	Mar 29, 2022
GSE188212	Comprehensive microRNA analysis across genome-edited colorectal cancer organoid models reveals miR-24 as a candidate regulator of cell survival	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	58	CSV SRA Run Selector	Praveen Sethupathy	Nov 15, 2022
GSE189700	Halo-enhanced Ago2 pulldown (HEAP) to identify miRNA targets in murine colonic epithelium +/- oncogenic K-Ras-G12D	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	18	BED CSV SRA Run Selector	Bing Shui	May 13, 2022
GSE189701	Halo-enhanced Ago2 pulldown (HEAP) to identify miRNA targets in murine colonic tumor +/- oncogenic K-Ras-G12D	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	36	BED CSV SRA Run Selector	Bing Shui	May 13, 2022
GSE206262	RNA and miRNA profiles in mouse hepatocytes ApcdeltaHep ROSA or DLK1DeltaWRE	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	17	CSV RESULTS TSV TXT	Angelique Gougelet	Feb 05, 2024
GSE221261	Aberrant miR-29 is a predictive feature of severe phenotypes in pediatric Crohn’s disease	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	21	CSV	Shehzad Sheikh	Dec 23, 2022
GSE235136	Trimannose-coupled antimiR-21 for macrophage-targeted inhalation treatment of acute inflammatory lung damage	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	151	CSV TXT	Stefan Engelhardt	Jul 12, 2023
GSE236059	Molecular and Metabolic Analysis of Arsenic-Exposed Humanized AS3MT Mice	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	64	CSV XLSX	Praveen Sethupathy	Jul 03, 2023
GSE134516	A universal, benchtop, gel-free method for the rapid and simultaneous isolation of all known classes of functional small RNAs	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana Drosophila melanogaster Mus musculus	49	CSV SRA Run Selector	Stefan Oberlin	Jul 01, 2020
GSE139191	tRNA-derived fragments and microRNAs in the maternal-fetal interface of a mouse maternal-immune-activation autism model	Non-coding RNA profiling by high throughput sequencing	Mus musculus	84	CSV SRA Run Selector	Anindya Dutta	Jan 28, 2020
GSE146342	tRNAArg-derived fragments mediate protein arginylation [tRF]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	CSV SRA Run Selector	Dawei W Dong	Aug 12, 2020
GSE146343	tRNAArg-derived fragments mediate protein arginylation [tRNA]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	CSV SRA Run Selector	Dawei W Dong	Aug 12, 2020
GSE163053	Dynamic changes in tRNA modifications and abundance during T-cell activation [ncRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	18	CSV SRA Run Selector	Roni Rak	Sep 15, 2021