GEO Browser - GEO

Series

Samples

Platforms

DataSets

243 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Homo sapiens
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	76	BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE114981	Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	66	BED TXT SRA Run Selector	Huacheng Luo	Dec 03, 2019
GSE115096	HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BED TXT SRA Run Selector	Huacheng Luo	Jan 27, 2021
GSE120409	A neutropenia-associated transcription factor mutation differentially impacts target genes in the cell-states traversed during granulocyte specification and commitment	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	833	BED H5 TXT	H. Leighton Grimes	Apr 06, 2020
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE131580	Combined Cohesin-Runx1 Deficiency Synergistically Perturbs Chromatin Looping and Causes Myelodysplastic Syndromes [Hi-C]	Other	Homo sapiens Mus musculus	16	BEDPE SRA Run Selector	Yotaro Ochi	Apr 07, 2020
GSE131583	Combined Cohesin-Runx1 Deficiency Synergistically Perturbs Chromatin Looping and Causes Myelodysplastic Syndromes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	123	BED	Yotaro Ochi	Apr 07, 2020
GSE137764	High Resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells	Other	Homo sapiens Mus musculus	85	BED MAT SRA Run Selector	David M Gilbert	Sep 20, 2019
GSE144281	Genetic interaction mapping and exon-resolution functional genomics with a hybrid Cas9-Cas12a platform	Other	Homo sapiens Mus musculus	14	FASTA TXT SRA Run Selector	Jason Moffat	Jan 28, 2020
GSE144336	Defining genome architecture at base-pair resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BW SRA Run Selector	Peng Hua	Apr 16, 2021
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE148716	Tau aggregates are RNA-protein assemblies that mis-localize multiple nuclear speckle components	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	22	CSV TSV SRA Run Selector	Evan Lester	Apr 06, 2021
GSE149180	MYC drives temporal evolution of small cell lung cancer subtypes by reprogramming neuroendocrine fate [SuperSeries]	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	38	MTX TSV	Trudy Oliver	May 28, 2020
GSE149493	Optimized photochemistry and enzymology enable efficient analysis of RNA structures and interactions in cells	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	21	TXT SRA Run Selector	Minjie Zhang	Mar 04, 2021
GSE152020	Joint profiling of histone modifications and transcriptome in single cells from mouse brain	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	102	SRA Run Selector	Zhu Chenxu	Dec 15, 2020
GSE153651	m6A directs the demethylation of histone H3K9me2 co-transcriptionall	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED BW TXT SRA Run Selector	linjian xia	Jul 01, 2020
GSE154353	A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells	Other	Homo sapiens Mus musculus	3	TXT ZIP SRA Run Selector	Mary Villanueva Arrastia	Aug 12, 2020
GSE155844	PIE-Seq: Identifying RNA-binding Protein Targets by Dual RNA-deaminase Editing and Sequencing	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	66	TXT SRA Run Selector	Xiangbin Ruan	May 17, 2023
GSE156933	A Quantitative Sequencing Method for 5-Formylcytosine in RNA	Other	Homo sapiens Mus musculus synthetic construct	52	TXT XLSX SRA Run Selector	Ruitu Lyu	Aug 01, 2021