R-loop landscapes during parental-to-zygotic transition in zebrafish

A single 3D chromatin compartment in amphioxus Hox cluster suggests a stepwise evolutionary origin for vertebrate Hox bimodal regulatory topologies

Base-resolution 5-hydroxymethylcytosine maps of sea urchin and lancelet embryos and adult tissues

ATAC-seq data in mouse and zebrafish limbs

A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation

The evolutionary emergence of the rac3b/rfng/sgca regulatory cluster refined mechanisms for hindbrain boundaries formation

Selective roles of vertebrate PCF11 in premature and full-length transcript termination

Selective roles of vertebrate PCF11 in premature and full-length transcript termination (zebrafish 3' mRNA-seq)

RNA helicase DDX21 mediates nucleotide stress responses

A map of cis-regulatory elements and 3D genome structures in zebrafish

5’ half of specific tRNAs feeds back to promote corresponding tRNA gene transcription in vertebrate embryos [small RNA-Seq, ssDRIP-seq]

Multi-modal characterization of chromatin architecture from 24 hpf whole zebrafish embryos

Chromatin architecture transitions from zebrafish sperm through early embryogenesis

CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression

5’ half of specific tRNAs feeds back to promote corresponding tRNA gene transcription in vertebrate embryos

Comprehensive genome wide analysis of Satb2 function during vertebrate embryogenesis

Loss of CPSF6 causes developmental disease via bimodal changes in polyadenylation site usage and protein expression [Zebrafish]

Loss of CPSF6 causes developmental disease via bimodal changes in polyadenylation site usage and protein expression

Rewiring of the epigenome and chromatin architecture by exogenously induced retinoic acid signaling during zebrafish embryonic development

Clock-driven waves of Tbx6 expression prefigure somite boundaries