GEO Browser - GEO

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125 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Arabidopsis thaliana		TXT
GSE29386	Transcriptional and translational effect of the lack of translation initiation factor eIF(iso)4E	Expression profiling by array Other	Arabidopsis thaliana	6	TXT	TZVETANKA DIMITROVA DINKOVA	Jul 26, 2013
GSE51474	rpl24b/WT polysome loading and transcript levels (Arabidopsis thaliana)	Expression profiling by array Other	Arabidopsis thaliana	18	CEL TXT	Albrecht G von Arnim	Jan 01, 2014
GSE51480	PAB/WT polysome loading and transcript levels (Arabidopsis thaliana)	Expression profiling by array Other	Arabidopsis thaliana	22	CEL TXT	Albrecht G von Arnim	Jan 01, 2014
GSE27292	High-resolution analysis of parent-of-origin-allelic expression in Arabidopsis seeds	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	2	TXT SRA Run Selector	Marc Rehmsmeier	Apr 30, 2011
GSE32284	IBM1, a JmjC domain histone demethylase, is involved in the regulation of RNA-directed DNA methylation through epigenetic control of RDR2 and DCL3 expression in Arabidopsis.	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	4	TXT SRA Run Selector	Di Fan	Aug 03, 2012
GSE40216	Study of expression changes and alternative splicing events during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors pathogen-infection	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	18	TXT SRA Run Selector	Servane Baufume	Sep 02, 2017
GSE42695	Genome-wide profiling of long non-coding RNAs in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	12	TXT WIG SRA Run Selector	Yijun Qi	Nov 28, 2015
GSE58974	Global analysis of the RNA-protein interaction and RNA secondary structure landscapes of the Arabidopsis nucleus	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	10	BED TXT SRA Run Selector	Sager Jayesh Gosai	Dec 16, 2014
GSE60929	Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs in Arabidopsis	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	9	TXT SRA Run Selector	Peng Du	Aug 30, 2014
GSE61439	Pol-IV dependent transcripts in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	42	PDF TXT WIG XLSX SRA Run Selector	Steve Jacobsen	Sep 13, 2015
GSE64389	RNA-directed DNA Methylation is associated with gene expression via chromosomal Interactions	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	12	TXT SRA Run Selector	M Jordan Rowley	Jun 01, 2016
GSE69802	Insights into the adaptive stress response of Arabidopsis thaliana to thermal stress by ribosomal profiling	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	6	TXT SRA Run Selector	Radoslaw Lukoszek	Oct 13, 2016
GSE75508	RNA-Seq and N6-Adenosine (m6A) Methylation profiling in Arabidopsis thaliana wild-type and fip37-4 LEC1:FIP37	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	14	BW TXT	Hao Yu	Jul 25, 2016
GSE77735	Identification of Multiple Proteins Coupling Transcriptional Regulation to Genome Stability in Arabidopsis thaliana	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Arabidopsis thaliana	67	TXT SRA Run Selector	Christopher Joel Hale	Jun 01, 2016
GSE79523	Arabidopsis Messenger RNA N6-methyladenosine Demethylation Regulates Plant Development	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	8	TXT SRA Run Selector	Guifang Jia	Feb 07, 2018
GSE81295	Buffer composition affects ribosome footprint precision in Arabidopsis root and shoot	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	8	TXT SRA Run Selector	Polly Yingshan Hsu	Nov 04, 2016
GSE82041	Endoplasmic reticulum as a hub organizing the activities of microRNAs and a subset of endogenous siRNAs in Arabidopsis	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	35	TXT	Chenjiang You	Dec 23, 2016
GSE86581	Revealing global translational reprogramming as a fundamental layer of immune regulation in plants	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	8	TXT SRA Run Selector	Xinnian Dong	May 25, 2017
GSE92922	Endoplasmic reticulum as a hub organizing microRNAs and a subset of endogenous siRNAs in Arabidopsis [Ribo-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	2	TXT SRA Run Selector	Chenjiang You	Dec 27, 2016
GSE98610	Ribosome footprints sequencing from Arabidopsis thaliana roots during Pi starvation	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	7	TXT SRA Run Selector	Jeremie Bazin	May 06, 2017