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5495 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus
GSE166544	The molecular basis of coupling between poly(A)-tail length and translational efficiency	Expression profiling by high throughput sequencing Other	Xenopus laevis Mus musculus Homo sapiens	79	TXT SRA Run Selector	David Bartel	Jul 07, 2021
GSE237050	Cohesin and CTCF do not assemble TADs in Xenopus sperm and male pronuclei	Other	Xenopus laevis Mus musculus Homo sapiens	19	HIC	Roman R Stocsits	Oct 25, 2023
GSE237051	Cohesin and CTCF do not assemble TADs in Xenopus sperm and male pronuclei	Genome binding/occupancy profiling by high throughput sequencing Other	Xenopus laevis Mus musculus Homo sapiens	28	BED BEDGRAPH HIC	Roman R Stocsits	Oct 25, 2023
GSE166155	KARR-seq reveals principles of high-order ribonucleoprotein structure assembly	Other	Vesicular stomatitis virus Respiratory syncytial virus Mus musculus Homo sapiens Drosophila melanogaster	67	PAIRS SRA Run Selector	Youzhi Cheng	Dec 06, 2023
GSE77213	High-throughput functional comparison of promoter and enhancer activities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	unidentified plasmid Mus musculus	60	TXT XLS XLSX SRA Run Selector	Thomas Andy Nguyen	May 23, 2016
GSE117473	Tracing the transitions from pluripotency to germ cell fate with CRISPR screening	Expression profiling by high throughput sequencing Other	unidentified plasmid Mus musculus	52	XLSX SRA Run Selector	Jamie Hackett	Oct 01, 2018
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	unidentified plasmid Suid alphaherpesvirus 1 Mus musculus	128	CSV TAR TSV TXT ZIP	Michael Wheeler	Apr 22, 2021
GSE180714	Rewiring of human neurodevelopmental gene regulatory programs by Human Accelerated Regions (HARs)	Other	unidentified plasmid Mus musculus Homo sapiens	14	BED TXT SRA Run Selector	Janet Song	Jul 24, 2021
GSE197979	Nucleosome density shapes kilobase-scale regulation by a mammalian chromatin remodeler	Other	unidentified plasmid Mus musculus	235	PICKLE	Megan Ostrowski	Aug 03, 2023
GSE202585	Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	unidentified plasmid Mus musculus	38	BW	Ioanna Tiniakou	Apr 12, 2024
GSE202942	Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation [Hoxb8-FL Brie sgRNA-Seq]	Other	unidentified plasmid Mus musculus	6	CSV	Ioanna Tiniakou	Apr 12, 2024
GSE68403	Development of a glycan microarray based method for ABO blood typing	Other	Trypanosoma cruzi Senegalia senegal Rhodotorula Quercus alba Pandalus borealis Pachymenia carnosa Ovis aries Oncorhynchus nerka Mus musculus Megathura crenulata Homo sapiens Gossypium hirsutum Gallus gallus Frangula alnus Dermestes lardarius Ceratonia siliqua Bothrops moojeni Bos taurus	220	TXT	Jeff Gildersleeve	Apr 28, 2016
GSE68405	A Simple, Inexpensive Strategy for Predicting Potential Beneficial Clinical Responses on Prostate Cancer Vaccine Therapy	Other	Trypanosoma cruzi Senegalia senegal Rhodotorula Quercus alba Pandalus borealis Pachymenia carnosa Ovis aries Oncorhynchus nerka Mus musculus Megathura crenulata Homo sapiens Gossypium hirsutum Gallus gallus Frangula alnus Dermestes lardarius Ceratonia siliqua Bothrops moojeni Bos taurus	331		Jeff Gildersleeve	Apr 28, 2016
GSE83087	Whole-Cell Cancer Vaccines Induce Large Antibody Responses to Carbohydrates and Glycoproteins	Other	Trypanosoma cruzi Senegalia senegal Quercus alba Pandalus borealis Pachymenia carnosa Ovis aries Oryctolagus cuniculus Oncorhynchus nerka Mus musculus Megathura crenulata Human immunodeficiency virus 1 Homo sapiens Gossypium hirsutum Gallus gallus Frangula alnus Dermestes lardarius Ceratonia siliqua Bothrops moojeni Bos taurus	168	GPR TXT	Jeff Gildersleeve	Dec 13, 2016
GSE110582	Whole genome mapping of DNA G-quadruplexes in multiple species by G4-seq	Other	Trypanosoma brucei Saccharomyces cerevisiae Plasmodium falciparum Mus musculus Leishmania major Homo sapiens Escherichia coli Drosophila melanogaster Danio rerio Cereibacter sphaeroides Caenorhabditis elegans Arabidopsis thaliana	24	BED BEDGRAPH SRA Run Selector	Giovanni Marsico	Aug 01, 2018
GSE120589	The mole genome reveals regulatory rearrangements associated with adaptive intersexuality	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Talpa occidentalis Mus musculus	70	BEDGRAPH BW HIC	Francisca Martinez Real	Oct 09, 2020
GSE219025	Co-option of the transcription factor SALL1 in mole ovotestis formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Talpa occidentalis Mus musculus	37	TXT	Francisca Martinez Real	Nov 29, 2022
GSE116329	Methylation of structured RNA by the m6A writer METTL16 is essential for mouse embryonic development	Expression profiling by high throughput sequencing Other	synthetic RNA Mus musculus	74	CSV SRA Run Selector	Ramesh Pillai	Sep 12, 2018
GSE68247	Massively parallel cis-regulatory analysis in the mammalian central nervous system	Expression profiling by high throughput sequencing Other	Synthetic plasmid Mus musculus	4	TXT SRA Run Selector	Joseph C Corbo	Oct 15, 2015
GSE194013	CRISPR activation screen to identify X-chromosomal Xist activators in male embryonic stem cells	Other	Synthetic plasmid Mus musculus	7	TXT	Till Schwämmle	Jan 26, 2022