GEO Browser - GEO

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686 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		TSV
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE243338	Collagen signaling and matrix stiffness regulate multipotency in glandular epithelial stem cells in mice	Expression profiling by array Expression profiling by high throughput sequencing Other	Mus musculus	12	CEL MTX TSV	Yura Song	Nov 12, 2024
GSE71831	Deletion of DXZ4 on the human inactive X chromosome eliminates superdomains and impairs gene silencing	Expression profiling by high throughput sequencing Other	Homo sapiens Macaca mulatta Mus musculus	101	HIC PDF TSV TXT SRA Run Selector	Miriam Huntley	Jul 19, 2016
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE84236	Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	200	BED BW TSV	Jiantao Shi	Sep 18, 2017
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE88987	Dynamic changes in chromatin accessibility in CD8+ T cells responding to viral infection	Expression profiling by high throughput sequencing Other	Mus musculus	44	TSV SRA Run Selector	James Scott-Browne	Dec 13, 2016
GSE92966	The role of Lgr5 intestinal cancer stem cells in tumour initiation, progression and metastasis	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Mus musculus	48	TSV TXT VCF	Robert Piskol	Mar 29, 2017
GSE95416	Global mRNA polarization regulates translation efficiency in the intestinal epithelium	Expression profiling by high throughput sequencing Other	Mus musculus	32	TSV	Andreas Moor	Aug 10, 2017
GSE96099	3′ sequencing from human Huntington's disease and control motor cortex and cerebellum.	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	39	TSV SRA Run Selector	Neil Aronin	Sep 21, 2017
GSE96611	Interplay between genome topology and gene regulation during somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	57	BEDGRAPH BW TSV	Thomas Graf	Jan 30, 2018
GSE99163	Global organization of the B cell genome by the transcription factor Pax5	Expression profiling by high throughput sequencing Other	Mus musculus	33	MTX TSV	Rhys Allan	Oct 07, 2018
GSE99521	YY1 is a structural regulator of enhancer-promoter loops	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	47	CLOUPE CSV TSV WIG	Richard A Young	Nov 16, 2017
GSE99978	Thiol-linked alkylation for the metabolic sequencing of RNA	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus synthetic construct	141	TSV TXT	Brian Reichholf	Sep 23, 2017
GSE102158	Lnc-31 acts as a molecular scaffold to control the Rock1 mRNA translation	Expression profiling by high throughput sequencing Other	Mus musculus	7	BED TSV SRA Run Selector	Mariangela Morlando	May 09, 2018
GSE106754	Divergent principles specifying inflammatory versus antiviral transcriptional programs in dendritic cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	TSV TXT	LAJOS SZELES	Jul 31, 2019
GSE108639	Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	TSV WIG	Koos Rooijers	Apr 21, 2019
GSE109252	Inter-chromosomal enhancer-promoter interaction critical for the appropriate level of Tead4 gene expression at the blastocyst stage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	TSV TXT	Kazuhiko Nakabayashi	Oct 21, 2019
GSE111855	Learning the cis sequence elements that determine AP-1 monomer specificity (RNA-seq data sets)	Expression profiling by high throughput sequencing Other	Mus musculus	17	BIGWIG TSV SRA Run Selector	Jenhan Tao	Jan 31, 2019