GEO Browser - GEO

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42 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		BROADPEAK
GSE270779	MYC couples SWI/SNF and metabolic reprogramming to sustain minimal residual disease in mTORC1-activated cancer cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	64	BROADPEAK BW NARROWPEAK VCF	Heng Du	Jun 10, 2025
GSE168828	HBO1 is an epigenetic determinant of hepatocyte-to-ductal reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Escherichia coli Mus musculus	86	BROADPEAK BW TBI TSV TXT SRA Run Selector	Wei-Chien Yuan	May 20, 2025
GSE255808	Transcriptional and epigenetic rewiring by the NUP98::KDM5A fusion oncoprotein directly activates CDK12	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BROADPEAK BW CSV NARROWPEAK	Thomas Eder	Feb 17, 2025
GSE250467	Oncohistone H3.3K27M-driven CREB5/ID1 Axis Mediates the Malignant Cell States of Diffuse Intrinsic Pontine Glioma (DIPG)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	52	BROADPEAK BW	Qiaoran Xi	Feb 03, 2025
GSE226578	Stem Cell Activity-Coupled Suppression of Endogenous Retrovirus Governs Adult Tissue Regeneration [ChIP-seq/hMeDIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	25	BED BROADPEAK	Yejing Ge	Oct 17, 2024
GSE234699	SMYD5 is a regulator of the mild hypothermia response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	127	BEDGRAPH BROADPEAK BW H5	Hans Tomas Bjornsson	Jul 26, 2024
GSE265888	Loop Stacking Attenuates Chromatin Boundaries in TCR Loci During Thymocyte Development	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	92	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE262006	Temporal constraints on enhancer usage and enhancer-promoter connectivity shape the regulation of limb gene transcription	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	147	BROADPEAK BW H5 NARROWPEAK TXT	Guillaume Andrey	Mar 22, 2024
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE241440	XIST directly regulates X-linked and autosomal genes in naïve human pluripotent cells [RAP-seq_mouse]	Other	Mus musculus	11	BEDGRAPH BROADPEAK	Kathrin Plath	Dec 15, 2023
GSE241444	XIST directly regulates X-linked and autosomal genes in naïve human pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	129	BEDGRAPH BROADPEAK	Kathrin Plath	Dec 13, 2023
GSE224489	Epigenetic data during proliferation and differentiation of C2C12 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	28	BED BEDPE BIGWIG BROADPEAK BW TXT	Mingyang Hu	Feb 10, 2023
GSE212438	Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics	Other	Mus musculus	24	BROADPEAK	Anne E West	Oct 11, 2022
GSE212441	Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	54	BROADPEAK TXT	Anne E West	Oct 11, 2022
GSE210181	Probing cell identity hierarchies by fate titration and collision during direct reprogramming [Cut & Tag]	Other	Mus musculus	8	BIGWIG BROADPEAK TSV TXT	Bob Hersbach	Sep 16, 2022
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens Mus musculus	80	BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE199059	Chromatin jets define the properties of cohesin-driven in vivo loop extrusion	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BEDGRAPH BROADPEAK HIC NARROWPEAK	Ya Guo	Aug 15, 2022
GSE166074	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run IFNgvsCtr]	Other	Mus musculus	21	BROADPEAK NARROWPEAK WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE166075	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run EZH2i]	Other	Mus musculus	24	BROADPEAK WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022