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389 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Mus musculus		TSV
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	unidentified plasmid Suid alphaherpesvirus 1 Mus musculus	128	CSV TAR TSV TXT ZIP	Michael Wheeler	Apr 22, 2021
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	synthetic construct Mus musculus	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE212159	De novo enhancer function in divergent hominin haplotypes	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	3	MTX TSV TXT	Craig Barrett Lowe	Nov 23, 2022
GSE218472	Enhancer grammar of liver cell types and hepatocyte zonation states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	79	BW TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023
GSE220949	Reconstructing regulative progenitor behaviors in synthetic embryos	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	29	TAR TSV TXT	Helene Kretzmer	Mar 05, 2024
GSE256215	Aberrant homeodomain-DNA cooperative dimerization underlies distinct developmental defects in two dominant CRX retinopathy models	Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus	32	BIGWIG NARROWPEAK TSV TXT	Shiming Chen	Nov 22, 2024
GSE269516	Multiplexed inhibition of immunosuppressive genes with Cas13d for on-demand combinatorial cancer immunotherapy	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Mus	46	TAR TSV TXT	Sidi Chen	Dec 05, 2024
GSE198250	High depth profiling of miRNA targets with chimeric eCLIP [eCLIPseq]	Expression profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus Homo sapiens	188	BED BW TSV	Gene Yeo	Jul 30, 2022
GSE198251	High depth profiling of miRNA targets with chimeric eCLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus Homo sapiens	204	BED BW TSV	Gene Yeo	Jul 29, 2022
GSE181236	Xist-seeded nucleation sites form local concentration gradients of silencing proteins to inactivate the X-chromosome	Other Expression profiling by high throughput sequencing	Mus musculus musculus x Mus musculus castaneus Mus musculus	47	BED BEDGRAPH MTX TSV	Kathrin Plath	Oct 26, 2021
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Homo sapiens	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE139430	Analysis of genome architecture during SCNT reveals a role of cohesin in impeding minor ZGA	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	75	TSV TXT SRA Run Selector	Ke Zhang	Jun 23, 2020
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE143293	Histone 1 deficiency drives lymphomagenesis through disruption of 3D chromatin architecture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	HIC MTX TSV TXT SRA Run Selector	Matt Teater	Sep 02, 2020
GSE145172	In vivo high-throughput screening of novel adeno-associated viral capsids identifies variants for transduction of adult neural stem cells within the subventricular zone	Other Expression profiling by high throughput sequencing	Mus musculus	4	CSV MTX TSV SRA Run Selector	Ana Martin-Villalba	Feb 13, 2020
GSE147182	Dynamic Regulation of Tfh Clonal Selection During the Germinal Center Reaction	Expression profiling by high throughput sequencing Other	Mus musculus	30	CSV HTML MTX TSV XLSX SRA Run Selector	Thiago Y Oliveira	Mar 19, 2020
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Mus musculus Homo sapiens	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE148716	Tau aggregates are RNA-protein assemblies that mis-localize multiple nuclear speckle components	Expression profiling by high throughput sequencing Other	Mus musculus Homo sapiens	22	CSV TSV SRA Run Selector	Evan Lester	Apr 06, 2021
GSE149121	Single-Cell RNA-seq immune profile of normal and inflammed mouse skin	Expression profiling by high throughput sequencing Other	Mus musculus	18	MTX TSV SRA Run Selector	Jeffrey B Cheng	Sep 26, 2020
GSE149180	MYC drives temporal evolution of small cell lung cancer subtypes by reprogramming neuroendocrine fate [SuperSeries]	Expression profiling by high throughput sequencing Other	Mus musculus Homo sapiens	38	MTX TSV	Trudy Oliver	May 28, 2020