GEO Browser - GEO

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286 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Mus musculus		MTX
GSE274040	Transcriptional and chromatin accessibility landscapes of hematopoiesis in a mouse model of breast cancer	Other	Mus musculus	16	ARROW MTX RDS TSV	Changxu Fan	Feb 05, 2025
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE165049	HOTTIP reinforces CTCF-defined TAD boundaries by forming R-loops to drive Wnt/b-catenin target gene expression in AML leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	51	BED H5 MTX TSV TXT SRA Run Selector	Huacheng Luo	Feb 18, 2022
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	BED MTX TAR TSV TXT ZIP	Aaron Diaz	Jul 05, 2022
GSE181236	Xist-seeded nucleation sites form local concentration gradients of silencing proteins to inactivate the X-chromosome	Other Expression profiling by high throughput sequencing	Mus musculus Mus musculus musculus x Mus musculus castaneus	47	BED BEDGRAPH MTX TSV	Kathrin Plath	Oct 26, 2021
GSE188525	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED BW MTX TSV	Anna Bigas	Apr 15, 2024
GSE198564	An Epigenetic Memory of Inflammation Induces Context-Dependent Lineage Plasticity in the Pancreas with Divergent Phenotypic Outcomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	115	BED BIGWIG BW H5 MTX TSV TXT	Rohit Chandwani	Oct 24, 2023
GSE198730	Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED CSV H5 HIC MTX TBI TSV XLSX	Vittorio Sartorelli	Jul 31, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023
GSE214116	Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	62	BED BW MTX TSV	E JOHN WHERRY	May 31, 2023
GSE220966	p53 dimers elicit unique tumor suppressive activities through an altered metabolic program	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	83	BED MTX TSV	Yuan Qi	Mar 01, 2023
GSE226177	Chromatin landscape alteration uncovers multiple transcriptional circuits during memory CD8+ T cell differentiation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	8	BED BEDGRAPH BEDPE H5 MTX TSV	Zhonghui Tang	Feb 17, 2025
GSE240577	Differential chromatin accessibility and transcriptional dynamics define breast cancer subtypes and their lineages	Other	Mus musculus	2	BED MTX TSV	Li Ding	Aug 10, 2023
GSE269258	HoxBlinc lncRNA reprograms CTCF-independent TADs to drive leukemic transcription and HSC dysregulation in NUP98 fusion transformed leukemia	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	61	BED BIGWIG BW HIC MTX NARROWPEAK TABULAR TSV	Suming Huang	Jan 31, 2025
GSE283096	The histone acetyltransferase MOZ is a molecular dependency and therapeutic target in NUP98-rearranged acute myeloid leukemia [WGS, ATACseq, CUT&RUN, scRNAseq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	38	BED BW MTX TSV	QINGSONG GAO	Jun 02, 2025
GSE203092	The long noncoding RNA Malat1 regulates CD8+ T cell differentiation by mediating epigenetic repression	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH MTX TSV TXT	John Chang	May 17, 2022