CTCF-RNA interactions orchestrate cell-specific chromatin loop organization [iCLIP2]

Pathogen-derived glyoxylate inhibits Tet2 DNA dioxygenase to facilitate bacterial persister formation

Let-7 restrains an oncogenic epigenetic circuit in AT2 cells to prevent ectopic formation of fibrogenic cell intermediates and pulmonary fibrosis

Enhancer adoption by an LTR retrotransposon generates viral-like particles causing developmental limb phenotypes

Transcription-coupled AID Deamination Damage Depends on ELOF1-associated RNA Polymerase II [ChIP-seq]

Transcription-coupled AID Deamination Damage Depends on ELOF1-associated RNA Polymerase II [PRO-seq]

Transcriptional and epigenetic rewiring by the NUP98::KDM5A fusion oncoprotein directly activates CDK12

Metformin reduces the competitive advantage of Dnmt3aR878H HSPCs

CTDP1 and RPB7 stabilize and license Pol II termination to reinitiation [PRO-seq]

Predictive modeling of chromatin features underlying replication timing

Isoform Usage as a Distinct Regulatory Layer Driving Nutrient-Responsive Metabolic Adaptation (RIP-seq)

Isoform Usage as a Distinct Regulatory Layer Driving Nutrient-Responsive Metabolic Adaptation

Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types.

Deletion of an evolutionary conserved TAD boundary leads to changes in gene expression, histology and function in mouse testis.

HoxBlinc lncRNA reprograms CTCF-independent TADs to drive leukemic transcription and HSC dysregulation in NUP98 fusion transformed leukemia

PRC1 and CTCF-Mediated Transition from Poised to Active Chromatin Loops Drives Bivalent Gene Activation

U6 snRNP inhibits the premature cleavage and polyadenylation of pre-mRNAs

Coordination between transcriptional orientation and nucleoprotein complexes generate chromatin configuration of IgH locus

A biophysical basis for the spreading behavior and limited diffusion of Xist [CHART-seq]

Mapping snoRNA-target RNA interactions in an RNA binding protein-dependent manner with chimeric eCLIP [chimeric eCLIP]