GEO Browser - GEO

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41 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Mus musculus		BEDPE
GSE152573	RUNX1 and CBFβ-SMMHC transactivate target genes together in abnormal myeloid progenitors for leukemogenesis	Expression profiling by high throughput sequencing Other	Mus musculus	33	BEDPE DIFF H5 TXT SRA Run Selector	Tao Zhen	Oct 06, 2020
GSE160943	Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BED BEDGRAPH BEDPE BW	Dean Tantin	Nov 26, 2022
GSE169121	Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61	BEDGRAPH BEDPE HIC TXT	Nadine Fournier	Jan 21, 2022
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	BEDPE BW TXT SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550	BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE194068	KLF4 inhibits early neural differentiation of ESCs by coordinating specific 3D chromatin structure	Expression profiling by high throughput sequencing Other	Mus musculus	8	BEDPE TXT	Niannian Li	Jun 01, 2022
GSE197024	Epigenetic modules governing skin epidermal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BEDPE HIC TXT	Stephen R Brooks	Jan 13, 2023
GSE204946	Restraint of IFN-γ expression through a distal silencer CNS–28 for tissue homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BEDPE BW TXT	Yaqiang Cao	Mar 01, 2023
GSE208106	Genomics of sexual cell fate transdifferentiation in the mouse gonad	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	51	BEDPE BIGWIG CSV	Micah Gearhart	Sep 30, 2022
GSE212568	Landscape of TFs binding in mouse early embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	57	BED BEDPE BW	Gran Young	Mar 03, 2024
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE236182	Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	37	BEDGRAPH BEDPE BIGWIG BW HIC TXT WIG	Sergio Niñerola	Dec 04, 2023
GSE237916	Regulation of T helper cell differentiation by the interplay between histone modification and chromatin interaction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	197	BEDPE BW DIFF TXT	Yaqiang Cao	Mar 01, 2024
GSE265888	Loop Stacking Attenuates Chromatin Boundaries in TCR Loci During Thymocyte Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE200114	Dynamic promoter-enhancer contacts contribute to spatiotemporal gene expression during mouse fetal development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	70	BEDPE BIGWIG HIC NARROWPEAK	Ming Hu	Sep 02, 2024
GSE206556	Epigenetic modules governing skin epidermal homeostasis [III]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BED BEDPE HIC TXT	Stephen R Brooks	Jan 12, 2023
GSE207801	Nuclear condensates of YAP fusion proteins as a critical driver for ependymoma	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	4	BEDPE	Zaili Luo	Oct 27, 2022
GSE226088	SALL1 enforces microglia-specific DNA binding and function of SMADs to establish microglia identity [3D]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	10	BEDPE HIC TXT	Christopher Glass	May 01, 2023
GSE226177	Chromatin landscape alteration uncovers multiple transcriptional circuits during memory CD8+ T cell differentiation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	8	BED BEDGRAPH BEDPE H5 MTX TSV	Zhonghui Tang	Feb 17, 2025