GEO Browser - GEO

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47 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		NARROWPEAK
GSE250267	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Danio rerio Mus musculus	34	BED BW COOL NARROWPEAK TXT	Aurelie Hintermann	Apr 17, 2024
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	76	BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE195592	Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds	Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus Mus musculus	46	BED BEDGRAPH BIGWIG BW COOL NARROWPEAK TXT	Aurelie Hintermann	Jun 20, 2022
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE123292	Satb1 integrates DNA sequence, shape, motif density and torsional stress to selectively bind a subset of putative targets in nucleosome-dense regions of the genome	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	20	BROADPEAK BW NARROWPEAK SRA Run Selector	Jan Liphardt	May 28, 2019
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE144716	Gene regulation by gonadal hormone receptors defines brain sex differences-[CUT&RUN]	Other	Homo sapiens Mus musculus	34	BW NARROWPEAK SRA Run Selector	Melody Wu	Apr 20, 2022
GSE144718	Gene regulation by gonadal hormone receptors defines brain sex differences	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	95	BW NARROWPEAK TSV	Melody Wu	Apr 20, 2022
GSE149420	UTX condensation underlies its tumor suppressive activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	78	BEDPE NARROWPEAK TXT SRA Run Selector	Bi Shi	Jul 15, 2021
GSE211214	Identifying gene combinations for targeting innate immune cells to enhance T cells activation	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	81	BW NARROWPEAK TAR	Oren Parnas	Sep 13, 2023
GSE226008	Histone Lactylation Antagonizes Senescence and Skeletal Muscle Aging by Modulating Aging-Related Pathways	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	72	BW MTX NARROWPEAK TSV TXT	Wei Tao	May 01, 2024
GSE237974	A novel CRISPR/Cas9 screening platform identifies an IRF1-SOCS1-mediated negative feedback loop that limits CXCL9 expression and anti-tumor immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	NARROWPEAK	Kevin C sek	Jul 22, 2023
GSE76481	Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by array	Mus musculus	85	NARROWPEAK TXT	Elzo de Wit	Mar 01, 2016
GSE78873	A long noncoding RNA lincRNA-EPS acts as a transcriptional brake to restrain inflammation	Other	Mus musculus	12	NARROWPEAK SRA Run Selector	Howard Chang	May 08, 2016
GSE80511	A multi-step transcriptional and chromatin cascade underlies motor neuron programming (ATAC-Seq)	Other	Mus musculus	4	BW NARROWPEAK SRA Run Selector	Shaun Mahony	Dec 07, 2016
GSE81203	Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BEDGRAPH BW NARROWPEAK WIG SRA Run Selector	Jacqueline Deschamps	Sep 16, 2016
GSE85185	YY1 and CTCF Orchestrate a 3D Chromatin Looping Switch during Early Neural Lineage Commitment	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED NARROWPEAK TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 22, 2017
GSE110897	Targeting enhancer switching overcomes non-genetic drug resistance in acute myeloid leukaemia [Click-seq]	Other	Mus musculus	5	NARROWPEAK SRA Run Selector	Mark Dawson	May 21, 2019
GSE110901	Targeting enhancer switching overcomes non-genetic drug resistance in acute myeloid leukaemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	86	HIC NARROWPEAK	Mark Dawson	May 21, 2019