GEO Browser - GEO

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65 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		BIGWIG
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE100400	Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	31	BIGWIG SRA Run Selector	Jan Postberg	Apr 30, 2018
GSE111105	Transcriptional analysis of PPARgamma activation in control and PPARgamma null macrophages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG	Hoang Nguyen	Sep 06, 2018
GSE111855	Learning the cis sequence elements that determine AP-1 monomer specificity (RNA-seq data sets)	Expression profiling by high throughput sequencing Other	Mus musculus	17	BIGWIG TSV SRA Run Selector	Jenhan Tao	Jan 31, 2019
GSE111856	Learning the cis sequence elements that determine AP-1 monomer specificity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	51	BIGWIG TSV	Jenhan Tao	Jan 31, 2019
GSE115110	NF-Y controls fidelity of transcription initiation at gene promoters through maintenance of the nucleosome-depleted region	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	29	BEDGRAPH BIGWIG BW SRA Run Selector	Raja Jothi	Jul 01, 2019
GSE116169	Paf1C regulates RNA polymerase II progression by modulating elongation rate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	66	BIGWIG SRA Run Selector	Liming H ou	Jun 28, 2019
GSE118794	The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	44	BIGWIG BW FASTA TSV SRA Run Selector	Thiago Y Oliveira	Oct 04, 2018
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE120630	IKZF2 is required for myeloid leukemic stem cells by driving self-renewal and inhibiting the myeloid differentiation program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18	BIGWIG TXT	Hyein Sophia Cho	Sep 29, 2018
GSE123457	YAP Partially Reprograms Chromatin Accessibility to Directly Induce Adult Cardiogenesis in Vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	12	BIGWIG TXT WIG SRA Run Selector	Matthew C Hill	Feb 14, 2019
GSE124463	Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 01, 2020
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE127995	Sensory experience remodels genome architecture in neural circuit to drive motor learning	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	154	BIGWIG HIC SRA Run Selector	Yue Yang	May 09, 2019
GSE134125	The RNA hairpin binder TRIM71 modulates alternative splicing by repressing MBNL1	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BIGWIG TSV	Panagiotis Papasaikas	Aug 01, 2019
GSE135296	Hippo Pathway Deletion in Adult Resting Cardiac Fibroblasts Initiates a Cell State Transition with Spontaneous and Self-Sustaining Fibrosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BIGWIG CSV TXT SRA Run Selector	Matthew C Hill	Oct 01, 2019
GSE137925	Global Profiling of RNA-Binding Protein Target Sites by LACE-seq	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	55	BIGWIG BW TXT SRA Run Selector	Yuanchao Xue	Apr 25, 2021
GSE138822	The chromatin remodeling enzyme Chd4 regulates genome architecture in the mouse brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BED BEDPE BIGWIG CSV HIC TXT SRA Run Selector	Jared V Goodman	Apr 13, 2020
GSE139420	In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	78	BED BIGWIG XLS SRA Run Selector	Ruitu Lyu	Feb 15, 2020