GEO Browser - GEO

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98 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		BEDGRAPH
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE123388	A Preformed Chromatin Architecture Ensures Robust Shh Transcription during Limb Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	54	BEDGRAPH BW	Christina Paliou	May 13, 2019
GSE138514	A complex regulatory landscape involved in the development of external genitals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH	Ana Rita Amandio Lhopitallier	Apr 25, 2020
GSE138510	A complex regulatory landscape involved in the development of external genitals [CnR]	Other	Mus musculus	3	BEDGRAPH SRA Run Selector	Ana Rita Amandio Lhopitallier	Apr 25, 2020
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE198775	A genome-wide relay of signalling-responsive enhancers drives hematopoietic specification	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	73	BED BEDGRAPH H5	Peter Keane	Dec 09, 2022
GSE83293	A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	77	BEDGRAPH BIGWIG BW	Ross Hardison	Jun 15, 2016
GSE83290	A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition [CaptureC]	Other	Mus musculus	26	BEDGRAPH SRA Run Selector	Ross Hardison	Jun 15, 2016
GSE142677	AGO HITS-CLIP Reveals Distinct Patterns of miRNA Regulation of Visceral and Brown Adipose Tissue Identity	Other Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH CSV SRA Run Selector	Sean O'Connor	Dec 28, 2019
GSE220529	Accelerated DNA replication fork speed due to Loss of R-Loops in Myelodysplastic Syndromes with SF3B1 Mutation	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	131	BEDGRAPH	David Rombaut	Feb 22, 2024
GSE180937	Aire regulates chromatin looping by evicting CTCF from domain boundaries and favoring accumulation of cohesin on super-enhancers	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	33	BEDGRAPH BIGWIG	CBDM Lab	Jul 30, 2021
GSE180933	Aire regulates chromatin looping by evicting CTCF from domain boundaries and favoring accumulation of cohesin on super-enhancers [Hi-C]	Other	Mus musculus	4	BEDGRAPH TXT SRA Run Selector	CBDM Lab	Jul 30, 2021
GSE207997	Analysis of Polycomb Repressive Complex 1 subunits across cell cycle in pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	BEDGRAPH BIGWIG TAR	Jordi Martorell-Marugan	Dec 02, 2022
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus synthetic construct	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE94431	Capturing the onset of PRC2-mediated repressive domain formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BEDGRAPH BW	Danny Reinberg	Jun 21, 2018
GSE97148	Clonally stable Vκ allelic choice instructs Igκ repertoire	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BEDGRAPH TXT SRA Run Selector	Yehudit Bergman	Apr 01, 2017
GSE143991	Defining a critical Nanog enhancer using chromatin-focused approaches identifies RNAPII recruitment as required for expression [CUT&Tag]	Other	Mus musculus	6	BEDGRAPH SRA Run Selector	Sridhar Rao	Dec 07, 2020
GSE195592	Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds	Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus Mus musculus	46	BED BEDGRAPH BIGWIG BW COOL NARROWPEAK TXT	Aurelie Hintermann	Jun 20, 2022
GSE140611	Dichotomous Engagement of HDAC3 Activity Governs Inflammatory Responses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	273	BEDGRAPH BIGWIG TDF	Hoang Nguyen	Apr 30, 2020
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021