GEO Browser - GEO

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1063 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus
GSE60034	Dynamic landscape of RNA structures in vivo reveals principles of post-transcriptional regulation [icSHAPE]	Other	Mus musculus	10	BW SRA Run Selector	Ryan Alexander Flynn	Mar 18, 2015
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE63472	Drop-Seq analysis of P14 mouse retina single-cell suspension	Expression profiling by high throughput sequencing Other	Mus musculus	7	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE64169	Dynamic landscape of RNA structures in vivo reveals principles of post-transcriptional regulation	Other	Mus musculus	12		Ryan Alexander Flynn	Mar 18, 2015
GSE67955	The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	18	BED TXT SRA Run Selector	Marissa Macchietto	Apr 30, 2019
GSE68582	Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State During Somatic Cell Reprogramming	Other Expression profiling by high throughput sequencing	Mus musculus	20	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 05, 2016
GSE69139	7SK-BAF axis controls pervasive transcription at enhancers [ATAC-Seq]	Other	Mus musculus	4	BW SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE69142	7SK-BAF axis controls pervasive transcription at enhancers [GRO-Seq]	Expression profiling by high throughput sequencing Other	Mus musculus	8	BW SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE69143	7SK-BAF axis controls pervasive transcription at enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	74	BW	Ryan Alexander Flynn	Feb 01, 2016
GSE71218	How C/EBPa creates an elite cell state for reprogramming to pluripotency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	68	BW TXT	samuel Collombet	Feb 19, 2016
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE72539	CTCF binding polarity determines chromatin looping [4C]	Other	Mus musculus	504	WIG SRA Run Selector	Elzo de Wit	Oct 29, 2015
GSE72599	7SK-BAF axis controls pervasive transcription at enhancers [icShape]	Other	Mus musculus	12	XLSX SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE72720	CTCF binding polarity determines chromatin looping	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	506	BED WIG	Elzo de Wit	Oct 29, 2015
GSE73065	High-throughput single-base resolution mapping of 2’-O-Methylated residues	Other	Homo sapiens Mus musculus	15	BEDGRAPH SRA Run Selector	Danny Incarnato	Sep 13, 2016
GSE73357	Heterogeneous ribosomes exist and selectively translate distinct subpools of mRNAs in stem cells	Expression profiling by high throughput sequencing Other	Mus musculus	20	TXT SRA Run Selector	Zhen Shi	Jun 15, 2017
GSE74353	RNA duplex map in living cells reveals higher order transcriptome structure	Other	Homo sapiens Mus musculus	14	TXT SRA Run Selector	Zhipeng Lu	Apr 04, 2016
GSE75684	RNA binds to a CBP regulatory motif to stimulate histone acetylation and transcription	Other Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	BIGWIG SRA Run Selector	Daniel Bose	Jan 12, 2017
GSE75880	Unlinking a lncRNA from its associated cis element [Capture-C]	Other	Mus musculus	4	BEDGRAPH SRA Run Selector	Vikram Paralkar	Jun 01, 2016