GEO Browser - GEO

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42 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			RESULTS
GSE211060	Population transcriptogenomics highlights impaired metabolism and small population sizes in tree frogs living in the Chernobyl Exclusion zone	Expression profiling by high throughput sequencing Other	Hyla orientalis	87	GVCF RESULTS	olivier ARMANT	Jun 15, 2023
GSE180959	Oncogenic lncRNAs alter epigenetic memory at a fragile chromosomal site in human cancer cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	13	BED RESULTS	Songjoon Baek	Mar 09, 2022
GSE219168	CRISPR screens identify gene targets at breast cancer risk loci	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	28	BED NARROWPEAK RESULTS	Jonathan Beesley	Mar 08, 2023
GSE230846	C2H2-zinc finger transcription factors bind RNA and function in diverse post-transcriptional regulatory processes.	Expression profiling by high throughput sequencing Other	Homo sapiens	219	RESULTS	Ulrich Braunschweig	Sep 08, 2024
GSE225110	Glial translatomes in stroke	Expression profiling by high throughput sequencing Other	Mus musculus	132	RESULTS	Marion Buckwalter	Feb 14, 2023
GSE281286	Identification of antigen-presenting cell-T cell interactions driving immune responses to food	Expression profiling by high throughput sequencing Other	Mus musculus	787	MTX RDS RESULTS TAB TSV TXT XLSX	Tiago Castro	Dec 19, 2024
GSE221884	Single-cell Circle-seq unveils diversity and cell specificity of circular DNA in single cells	Expression profiling by high throughput sequencing Other	Homo sapiens	344	BED BEDPE RESULTS	Jinxin Phaedo Chen	Jan 02, 2024
GSE197344	Compound heterozygous mutations in the noncoding RNU4ATAC gene affect the homeostasis and function of the Integrator complex	Expression profiling by high throughput sequencing Other	Homo sapiens	6	CSV RESULTS TAB TXT	Audric Cologne	Dec 01, 2022
GSE214916	Enhancer engagement sustains oncogenic transformation and progression of B-cell precursor acute lymphoblastic leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	57	BEDPE BW MTX NARROWPEAK RESULTS TSV	Stefano Di Giovenale	Jun 27, 2024
GSE272629	Passive shaping of intra- and intercellular m6A dynamics via mRNA metabolism	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	128	RESULTS TXT	David Dierks	Jul 25, 2024
GSE183264	Improved Super-Resolution Ribosome Profiling Reveals Prevalent Translation of Upstream ORFs and Small ORFs in Arabidopsis	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	12	RESULTS SRA Run Selector	Polly Hsu	Sep 20, 2023
GSE207163	Transcriptional repression by a secondary DNA binding surface of DNA topoisomerase I safeguards against hypertranscription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	62	BED BW RESULTS TXT XLSX	Zhenhua hu	May 29, 2023
GSE201681	Dissecting genetic components associated with eye disease using integrative genomic analysis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	24	BW RESULTS	Kirsty Jamieson	Apr 30, 2022
GSE185884	Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BED BW HIC RESULTS	Hyoung-Pyo Kim	Jan 04, 2023
GSE227664	Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	27	BED BW HIC RESULTS	Hyoung-Pyo Kim	Jun 02, 2023
GSE241927	Dissection of a CTCF topological boundary uncovers principles of enhancer-oncogene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	65	BW HIC RESULTS	Kyung Lock Kim	Mar 06, 2024
GSE244255	CRISPR screening in human trophoblast stem cells reveals both shared and distinct aspects of human and mouse placental development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	65	BW RESULTS	Eri H Kobayashi	Nov 10, 2023
GSE245325	Dynamics and consequences of widespread transcript isoform changes during neuronal differentiation	Expression profiling by high throughput sequencing Other	Homo sapiens	33	RESULTS	Dr. Andreas Mayer	Apr 10, 2024
GSE173860	The Polycomb protein RING1B enables estrogen-mediated gene expression by promoting enhancer-promoter interaction and R-loop formation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	76	BIGWIG BW RESULTS TXT SRA Run Selector	Lluis Morey	Sep 29, 2021
GSE162194	Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forks	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	50	BW HIC RESULTS	Ryuichiro Nakato	Jun 15, 2022