GEO Browser - GEO

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376 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other			TSV
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE211736	Joint epigenome profiling reveals cell-type-specific gene regulatory programs in human cortical organoids	Expression profiling by high throughput sequencing Other	Escherichia coli Homo sapiens Mus musculus	27	BW FA PICKLE TAB TSV TXT SRA Run Selector	Boyan Bonev	Aug 23, 2023
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE148716	Tau aggregates are RNA-protein assemblies that mis-localize multiple nuclear speckle components	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	22	CSV TSV SRA Run Selector	Evan Lester	Apr 06, 2021
GSE149180	MYC drives temporal evolution of small cell lung cancer subtypes by reprogramming neuroendocrine fate [SuperSeries]	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	38	MTX TSV	Trudy Oliver	May 28, 2020
GSE162739	BAP1 activity regulates Polycomb occupancy and global chromatin condensation counteracting diffuse PCGF3/5-dependent H2AK119ub1 deposition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	192	BED RPKM TSV TXT SRA Run Selector	Federico Rossi	Jun 27, 2021
GSE164956	Robust RNA editing via recruitment of endogenous ADARs using circular guide RNAs	Other	Homo sapiens Mus musculus	7	TSV SRA Run Selector	Dario Meluzzi	Nov 15, 2021
GSE165049	HOTTIP reinforces CTCF-defined TAD boundaries by forming R-loops to drive Wnt/b-catenin target gene expression in AML leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	51	BED H5 MTX TSV TXT SRA Run Selector	Huacheng Luo	Feb 18, 2022
GSE168363	In vivo adenine base editing of PCSK9 in mice and macaques reduces LDL-cholesterol levels [RNA-seq]	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	22	TSV VCF SRA Run Selector	Tanja Rothgangl	Apr 13, 2021
GSE168365	In vivo adenine base editing of PCSK9 in mice and macaques reduces LDL-cholesterol levels	Expression profiling by high throughput sequencing Other	Homo sapiens Macaca fascicularis Mus musculus	529	TSV TXT VCF	Tanja Rothgangl	Apr 13, 2021
GSE174226	High-content single-cell combinatorial indexing	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	6	BED CSV RDS TSV TXT SRA Run Selector	Ryan M Mulqueen	May 28, 2021
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	BED MTX TAR TSV TXT ZIP	Aaron Diaz	Jul 05, 2022
GSE175803	m6Am RNA methyltransferases PCIF1 regulate tumorigenesis of colorectal cancer and its immune responses to anti-PD-1 therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BW CSV TSV TXT SRA Run Selector	Lingling Wang	Nov 12, 2022
GSE184757	Study of 5mC-DNA, m6A-RNA and RNA-expression in HeLa, ES and EB	Methylation profiling by genome tiling array Other Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	306	BW IDAT TSV TXT	Martin Bizet	Jan 10, 2025
GSE188391	A genetic-metabolic axis for metastatic liver organotropism	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus blank sample	139	CSV H5 MTX TSV SRA Run Selector	Meri Rogava	Aug 29, 2023
GSE188954	Transcriptomics of skin reveal potential molecular mechanisms of psoriasis	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	6	MTX TAR TSV	Dijun Chen	Dec 17, 2021
GSE198250	High depth profiling of miRNA targets with chimeric eCLIP [eCLIPseq]	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	188	BED BW TSV	Gene Yeo	Jul 30, 2022
GSE198251	High depth profiling of miRNA targets with chimeric eCLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	204	BED BW TSV	Gene Yeo	Jul 29, 2022
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023