GEO Browser - GEO

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41 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other			BEDPE
GSE166177	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [HiChIP]	Other	Mus musculus	6	BEDPE HIC TXT SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550	BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE214918	Three-way contact analysis characterizes the higher-order organization of the Tcra locus	Other	Mus musculus	33	BEDGRAPH BEDPE MATRIX	Hao bingtao	Nov 28, 2022
GSE265888	Loop Stacking Attenuates Chromatin Boundaries in TCR Loci During Thymocyte Development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	85	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE197024	Epigenetic modules governing skin epidermal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BEDPE HIC TXT	Stephen R Brooks	Jan 13, 2023
GSE206556	Epigenetic modules governing skin epidermal homeostasis [III]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BED BEDPE HIC TXT	Stephen R Brooks	Jan 12, 2023
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	BEDPE BW TXT SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE204946	Restraint of IFN-γ expression through a distal silencer CNS–28 for tissue homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BEDPE BW TXT	Yaqiang Cao	Mar 01, 2023
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE237916	Regulation of T helper cell differentiation by the interplay between histone modification and chromatin interaction	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	197	BEDPE BW DIFF TXT	Yaqiang Cao	Mar 01, 2024
GSE153574	A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression [Hi-C]	Other	Mus musculus	4	BEDPE HIC SRA Run Selector	Zachary Carico	Feb 23, 2021
GSE243851	Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH BEDPE BW HIC NARROWPEAK	William Chang	Oct 16, 2023
GSE247940	Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation [Hi-C]	Other	Mus musculus	10	BEDPE HIC	Andy Chen	Dec 31, 2024
GSE242586	ChIA-PET from embryonic stem cell (ENCSR309NAP)	Other	Mus musculus	2	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242587	ChIA-PET from embryonic stem cell (ENCSR543IIL)	Other	Mus musculus	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242590	ChIA-PET from spleen (ENCSR314BGZ)	Other	Mus musculus	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242598	ChIA-PET from embryonic stem cell (ENCSR067GFU)	Other	Mus musculus	2	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242608	ChIA-PET from Patski (ENCSR564BAB)	Other	Mus musculus	3	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242635	ChIA-PET from embryonic stem cell (ENCSR466YGP)	Other	Mus musculus	2	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023