GEO Browser - GEO

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165 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other			BED
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE173821	MicroRNA-486 is an epigenetic modulator of Duchenne muscular dystrophy pathologies [eCLIP-seq]	Other	Mus musculus	12	BED BW SRA Run Selector	Matthew S Alexander	May 04, 2022
GSE200877	Identification of MATR3 RNA-interactors in WT and Charme KO condtion during cardiac development [CLIP-seq]	Other	Mus musculus	8	BED BW	Monica Ballarino	Mar 18, 2023
GSE171749	SETDB1/NSD dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	88	BED BROADPEAK BW HIC TXT SRA Run Selector	Amandine BARRAL	Jan 25, 2022
GSE152176	H1 linker histones regulate the balance of repressive and active chromatin domains via localized genomic compaction [Hi-C]	Other	Mus musculus	4	BED BEDGRAPH MATRIX SRA Run Selector	Boris Bartholdy	Sep 09, 2020
GSE185255	Integration of 3D genome architecture and local chromatin features uncovers enhancers underlying craniofacial-specific cartilage defects	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BED BEDGRAPH COOL NARROWPEAK SRA Run Selector	Qian Bian	Jan 04, 2023
GSE188524	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development [Cut&Tag]	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BW SRA Run Selector	Anna Bigas	Apr 15, 2024
GSE188525	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED BW MTX TSV	Anna Bigas	Apr 15, 2024
GSE265888	Loop Stacking Attenuates Chromatin Boundaries in TCR Loci During Thymocyte Development	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	92	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE197024	Epigenetic modules governing skin epidermal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BEDPE HIC TXT	Stephen R Brooks	Jan 13, 2023
GSE206556	Epigenetic modules governing skin epidermal homeostasis [III]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BED BEDPE HIC TXT	Stephen R Brooks	Jan 12, 2023
GSE190955	Complex Genomic Patterns of Abasic Sites in Mammalian DNA Revealed by High-Resolution SSiNGLe-AP Method	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	271	BED FA TXT SRA Run Selector	Huifen Cao	Sep 15, 2022
GSE239751	Genome-wide Profiles of DNA Damage Represent Highly Accurate Predictors of Chronological Age	Expression profiling by high throughput sequencing Other	Mus musculus	36	BED TXT	Huifen Cao	Mar 25, 2024
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE226240	Serine 970 of RNA helicase MOV10 is phosphorylated and controls unfolding activity and fate of mRNAs targeted for AGO2-mediated silencing [eCLIP-Seq]	Other	Mus musculus	4	BED	Stephanie Ceman	Feb 28, 2023
GSE198564	An Epigenetic Memory of Inflammation Induces Context-Dependent Lineage Plasticity in the Pancreas with Divergent Phenotypic Outcomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	115	BED BIGWIG BW H5 MTX TSV TXT	Rohit Chandwani	Oct 24, 2023
GSE205942	Small intestine and colon tissue-resident memory CD8+ T cells exhibit transcriptional, epigenetic, and functional heterogeneity in concert with differential dependence on Eomesodermin	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BED CSV H5 TSV	John Chang	Dec 28, 2022
GSE243851	Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH BEDPE BW HIC NARROWPEAK	William Chang	Oct 16, 2023