GEO Browser - GEO

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53 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Other			BW
GSE202042	High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	78	BEDGRAPH BW	Maximilian Christian von der Linde	Jun 22, 2024
GSE86464	HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons	Expression profiling by array Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	124	BED BW CEL CSV	Gene Yeo	Oct 20, 2016
GSE97669	Promoter of lncRNA gene PVT1 is a tumor suppressor DNA element	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	267	BW NARROWPEAK TXT	Howard Y. Chang	May 31, 2018
GSE119148	Chromatin Conformation Dynamics are essential to Control the Transcription of INK4/ARF locus	Other	Homo sapiens Mus musculus	16	BW SRA Run Selector	Chunliang Li	Aug 01, 2024
GSE121355	A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	201	BEDGRAPH BW HIC TXT SRA Run Selector	Seolkyoung Jung	Aug 01, 2019
GSE129529	Topoisomerase II-induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	73	BW TXT	Yaakov Maman	Apr 24, 2019
GSE140677	Intra-Vk Cluster Recombination Shapes the Ig Kappa Locus Repertoire	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	69	BW	Yaakov Maman	Jan 01, 2020
GSE144716	Gene regulation by gonadal hormone receptors defines brain sex differences-[CUT&RUN]	Other	Homo sapiens Mus musculus	34	BW NARROWPEAK SRA Run Selector	Melody Wu	Apr 20, 2022
GSE144718	Gene regulation by gonadal hormone receptors defines brain sex differences	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	95	BW NARROWPEAK TSV	Melody Wu	Apr 20, 2022
GSE146999	Start codon disruption with CRISPR/Cas9 prevents murine Fuchs' endothelial corneal dystrophy	Other	Homo sapiens Mus musculus	6	BW	Hironori Uehara	Sep 01, 2020
GSE162609	ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	185	BEDPE BW WIG	Jinxiu Li	Jan 01, 2023
GSE210317	Active DNA demethylation promotes cell fate specification and the DNA damage response	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	121	BW TXT	Wei Wu	Dec 01, 2022
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE69887	PAR-TERRA RNA directs homologous sex chromosome pairing	Other Expression profiling by high throughput sequencing	Mus musculus	25	BW WIG SRA Run Selector	Hsueh-Ping Chu	Jul 10, 2017
GSE74356	Long Neural Genes Harbor Recurrent DNA Break Clusters in Neural Stem/Progenitor Cells	Other Expression profiling by high throughput sequencing	Mus musculus	88	BW TXT SRA Run Selector	Bjoern Schwer	Feb 15, 2016
GSE82255	Destabilization of B2 RNA by EZH2 activates the stress response	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	61	BED BW TXT SRA Run Selector	Athanasios Zovoilis	Dec 19, 2016
GSE95116	The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BW HIC TXT	Bo Wen	Dec 03, 2017
GSE97871	Tissue-specific CTCF/Cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	88	BW WIG	Jelena M Telenius	Jun 14, 2017
GSE110604	Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BED BW	Jerome Menet	May 08, 2018