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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing	Homo sapiens			BW
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868		BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE118785	H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	43		BW TDF SRA Run Selector	Carmen Rivas	Aug 30, 2019
GSE151426	Temporal evolution of cellular heterogeneity during the progression to advanced, AR-negative prostate cancer	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	53		BW H5 TXT	Nicholas Brady	Apr 07, 2021
GSE159043	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	23		BED BROADPEAK BW COV	Falong Lu	Jun 27, 2022
GSE185708	A hyper-quiescent chromatin state is a barrier to productive regeneration during aging.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	256		BW TXT	Supriyo De	Mar 17, 2023
GSE217116	Optimized bisulfite sequencing reveals the lack of 5-methylcytosine in mammalian mitochondrial DNA [WGBS]	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	13		BW	Zhenyu Shao	Jun 12, 2023
GSE217117	Optimized bisulfite sequencing analysis reveals the lack of 5-methylcytosine in mammalian mitochondrial DNA	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	16		BW	Zhenyu Shao	Jun 12, 2023
GSE200839	TNRC18 recognizes H3K9me3 to mediate transposable elements silencing at ERV regions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	115		BW TXT	Gang Greg Wang	Jul 23, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171		BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE225614	Ultrafast Bisulfite Sequencing for Efficient and Accurate 5-Methylcytosine Detection in DNA and RNA	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	44		BW TSV	Chang Ye	Oct 13, 2023
GSE183934	Perturbation of TET2 condensation induces genome-wide promiscuous DNA hypomethylation and curtails leukemia cell growth	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	50		BW HIC TXT SRA Run Selector	Jia Li	Jun 16, 2024
GSE236728	Synthetic essentiality of thymine DNA glycosylase in p53-deficient cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	73		BEDGRAPH BW MTX NARROWPEAK TSV	Zhenyu Shao	Jun 19, 2024
GSE242724	Base-resolution m5C profiling across the mammalian transcriptome by bisulfite-free enzyme-assisted chemical labeling approach	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	104		BW CSV TXT XLS	Xiaoyu Li	Jul 11, 2024
GSE184757	Study of 5mC-DNA, m6A-RNA and RNA-expression in HeLa, ES and EB	Methylation profiling by genome tiling array Other Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	306		BW IDAT TSV TXT	Martin Bizet	Jan 10, 2025
GSE169102	DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	187		BW COV MTX TSV TXT	Guoping Fan	May 05, 2025