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94 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		WIG
GSE65860	5-hydroxymethylcytosine dynamics during retinal maturation	Methylation profiling by high throughput sequencing	Mus musculus	5	WIG SRA Run Selector	Arshan Perera	Apr 02, 2015
GSE117732	A novel role for the conserved, orphan deaminase APOBEC2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT WIG	Nina Papavasiliou	Jul 26, 2021
GSE117731	A novel role for the conserved, orphan deaminase APOBEC2 [methylation]	Methylation profiling by high throughput sequencing	Mus musculus	30	TXT WIG SRA Run Selector	Nina Papavasiliou	Jul 26, 2021
GSE34267	Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity	Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	12	BED CEL WIG	Raja Jothi	Jan 04, 2012
GSE34887	Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity [MRE-seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	BED WIG SRA Run Selector	Raja Jothi	Jan 06, 2012
GSE279076	Altered Ten Eleven Translocation Methylcytosine Dioxygenase Expression and DNA Hydroxymethylation in a Mouse Model of Prostate Cancer [hMeDIP-seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	WIG	Shannon Kinney	Mar 21, 2025
GSE155600	BANP opens chromatin and activates CpG island regulated genes [MNase-seq]	Methylation profiling by high throughput sequencing	Mus musculus	6	WIG SRA Run Selector	Dirk Schuebeler	May 17, 2021
GSE155604	BANP opens chromatin and activates CpG-island-regulated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	115	WIG	Dirk Schuebeler	May 17, 2021
GSE116704	CG dinucleotides enhance promoter activity independent of DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	186	TAB WIG SRA Run Selector	Dirk Schuebeler	Jan 20, 2019
GSE66438	Combinatorial DNA methylation codes at repetitive elements	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	27	WIG	Christophe Papin	Feb 22, 2017
GSE77768	Combinatorial DNA methylation codes at repetitive elements [MeDIP-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	20	WIG SRA Run Selector	Christophe Papin	Feb 22, 2017
GSE123249	Contribution of H3K4 demethylase KDM5B to nucleosome organization in embryonic stem cells revealed by micrococcal nuclease sequencing	Methylation profiling by high throughput sequencing	Mus musculus	2	WIG SRA Run Selector	Benjamin L Kidder	Apr 23, 2019
GSE107303	CpG islands shape the epigenome landscape.	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	15	BW WIG XLSX SRA Run Selector	Christophe Papin	Oct 02, 2020
GSE82314	Cytosine modifications modulate the chromatin architecture of transcriptional enhancers	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	WIG SRA Run Selector	Gilles Salbert	Mar 03, 2017
GSE77730	DNA IP for 5hmC modified CpGs in the liver of control mice and a Tet1 -/- mouse liver [hmeDIP-seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	WIG SRA Run Selector	John Paterson Thomson	May 17, 2016
GSE30206	DNA binding factors shape the mouse methylome at distal regulatory regions.	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by high throughput sequencing	Mus musculus	23	PAIR WIG	Dirk Schuebeler	Dec 09, 2011
GSE81175	DNA methylation and hydroxymethylation profiles were compared between mouse PGCLCs isolated from 6-day culture embryoid bodies, their precursor cells (ESCs, iPSCs, and EpiLCs), and E12.5 in vivo mouse PGCs.	Methylation profiling by high throughput sequencing	Mus musculus	43	WIG SRA Run Selector	Toshi Shioda	Aug 22, 2016
GSE114792	DNA methylation-mediated regulation of adipose tissue macrophages during high-fat diet-induced obesity	Methylation profiling by high throughput sequencing	Mus musculus	2	WIG SRA Run Selector	Prakash Nagarkatti	May 23, 2018
GSE176461	DNA sequence and chromatin modifiers determine epigenetic bistability at imprinting control regions	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	COV TAB WIG	Tuncay Baubec	Jul 20, 2022
GSE42629	Density and methylation state of CpG dinucleotides define histone variant specific retention of nucleosomes in mouse spermatozoa	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	21	TAB WIG SRA Run Selector	Antoine Peters	Jun 15, 2013