GEO Browser - GEO

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47 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing	Mus musculus		BED
GSE112276	Transcriptome Mapping of Internal N7-methylguanosine Methylome in Mammalian mRNA	Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	104	BED FPKM_TRACKING TXT XLSX SRA Run Selector	Li-Sheng Zhang	Apr 26, 2019
GSE112554	Highly scalable generation of DNA methylation profiles in single cells	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	6	BED SRA Run Selector	Ryan M Mulqueen	Apr 12, 2018
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE136010	Epigenomic analysis of Parkinson's disease neurons identifies TET2 loss as neuroprotective	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BED TXT	Lee Marshall	Jun 19, 2020
GSE203109	Single-molecule simultaneous profiling of DNA methylation and DNA-protein interactions with Nanopore-DamID	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BED BEDGRAPH BW	Seth Cheetham	May 15, 2025
GSE232216	Light-Assisted Single-Stranded Open-Chromatin Analysis in K562 and Spatially Localized Neuronal Single Cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Third-party reanalysis Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	445	BED	Junhyong Kim	Oct 19, 2023
GSE66847	Dynamics of 5-hmC in cardiac maturation and hypertrophy	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	34	BED BW	Bioinformatics Unit	Jun 21, 2016
GSE69101	Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	77	BED BW	MS Vijayabaskar	Feb 25, 2016
GSE72856	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH	Francesco Neri	Feb 25, 2017
GSE73014	Genome-wide DNA-methylation and transcriptome change due to lncRNA H19 knockdown in myotubes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	BED	Na Zhang	Nov 09, 2015
GSE75426	Local compartment changes and regulatory landscape alterations in histone H1-depleted cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	BED TXT SRA Run Selector	Geert Geeven	Nov 30, 2015
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE84373	Vitamin C and L-Proline antagonistic effects capture alternative states in the pluripotency continuum	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	22	BED TXT	Cristina D'Aniello	Feb 03, 2017
GSE85251	Postnatal DNA demethylation and its role in tissue maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BED TXT SRA Run Selector	Klaus H Kaestner	May 09, 2018
GSE87623	Vitamin C induced epigenomic remodeling in IDH1 mutant acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED TXT WIG SRA Run Selector	Martin Hirst	Jul 01, 2017
GSE90509	Neuronal activity, TGFβ signaling and unpredictable chronic stress affect transcription of Gadd45 family members in vitro and in vivo [MeDIP-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	7	BED BW SRA Run Selector	Henriette Franz	Dec 31, 2017
GSE90513	Neuronal activity, TGFβ signaling and unpredictable chronic stress affect transcription of Gadd45 family members in vitro and in vivo	Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	15	BED BW CEL	Henriette Franz	Dec 31, 2017
GSE95720	Individual retrotransposon integrants are differentially controlled by KZFP/KAP1-dependent histone methylation, DNA methylation and TET-mediated hydroxymethylation in naïve embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BED PILEUP TXT SRA Run Selector	Julien Duc	Feb 28, 2018
GSE98186	Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells in vivo [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Hyun Jung Park	Apr 25, 2018
GSE98191	Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	5	BED BW	Hyun Jung Park	Apr 25, 2018