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742 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			TSV
GSE298243	A Single-Cell Atlas of DNA Methylation in Autism Spectrum Disorder Reveals Distinct Regulatory and Aging Signatures	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	49	DOCX RDATA TAR TSV	Nasser Elhajjaoui	Jun 17, 2025
GSE239278	Epigenetic remodeling and 3D chromatin reorganization governed by NKX2-1 drive neuroendocrine prostate cancer	Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	206	BIGWIG BW H5 MCOOL NARROWPEAK TSV TXT	Jindan Yu	Jun 06, 2025
GSE287529	Engineering an RNA-protein binding module for higher transgene protein production and improved long-term durability [BSAS]	Methylation profiling by high throughput sequencing	Arabidopsis thaliana	32	TSV	Richard Keith Slotkin	Jun 02, 2025
GSE203487	Whole genome bisulfite sequence in heat treated rice seeds	Methylation profiling by high throughput sequencing	Oryza sativa	2	COV TSV	Yushi Ishibashi	May 20, 2025
GSE286948	DNA hypomethylation comprising transposable elements defines human regulatory T cells in cutaneous tissue and identifies their blood recirculating counterpart	Methylation profiling by high throughput sequencing	Homo sapiens	18	TSV	Niklas Beumer	May 20, 2025
GSE292839	An epigenetic clock for Xenopus tropicalis	Methylation profiling by high throughput sequencing	Xenopus tropicalis	192	TSV	Matteo Pellegrini	May 17, 2025
GSE169102	DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	187	BW COV MTX TSV TXT	Guoping Fan	May 05, 2025
GSE266370	Age-dependent DNA methylation characterization of the rat neurohypophysis	Methylation profiling by high throughput sequencing	Rattus norvegicus	6	TSV	John Andrew Watt	May 01, 2025
GSE266371	Maturational alterations in the transcriptome and methylome of the rat neurohypophysis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Rattus norvegicus	14	TSV	John Andrew Watt	May 01, 2025
GSE292803	Single-cell multi-omic and multi-region atlas of the Aging Mouse Brain	Methylation profiling by high throughput sequencing Other	Mus musculus	108	TAR TSV	Joseph R Ecker	Apr 30, 2025
GSE275017	Total plasma cfDNA methylation in kidney transplant recipients provides insight into acute allograft rejection pathophysiology	Methylation profiling by high throughput sequencing	Homo sapiens	20	TSV	Benjamin L Spector	Apr 25, 2025
GSE294032	Nuclear receptor-SINE B1 network modulates expanded pluripotency in blastoids and blastocysts.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW COV MTX TSV	Yingying Zeng	Apr 10, 2025
GSE163200	Extensive N4 cytosine methylation of Marchantia genes is essential for sperm function [1]	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Marchantia polymorpha subsp. ruderalis	34	BW GFF H5 JSON TSV SRA Run Selector	Xiaoqi Feng	Apr 09, 2025
GSE254154	Extensive N4 Cytosine Methylation is Essential for Marchantia Transcriptional Programming and Sperm Function	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Marchantia polymorpha subsp. ruderalis	36	BW GFF H5 JSON TSV	Xiaoqi Feng	Apr 09, 2025
GSE262401	Assembly and annotation of Solanum dulcamara and Solanum nigrum plant genomes, two nightshades with contrasting susceptibilities to Ralstonia solanacearum	Methylation profiling by high throughput sequencing	Solanum dulcamara	1	TSV	Sara Franco Ortega	Apr 09, 2025
GSE278032	Novel brain-penetrant inhibitor of G9a methylase blocks Alzheimer’s disease proteopathology for precision medication	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	TSV TXT	John Wrobel	Mar 18, 2025
GSE249143	DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling	Other Methylation profiling by high throughput sequencing	Mus musculus	60	CSV JSON MTX PNG TSV	Emily Lo	Mar 10, 2025
GSE280822	Dual DNA demethylation mechanisms implement epigenetic memory driven by the pioneer factor PAX7	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BIGWIG TSV	Juliette Emilie Harris	Mar 10, 2025
GSE214552	Methylation comparison between ash tolerant and susceptible trees to ash dieback [methylation]	Methylation profiling by high throughput sequencing	Fraxinus excelsior	2	TSV	Sara Franco Ortega	Mar 03, 2025
GSE214553	Methylation Fraxinus excelsior 2451S ONT genome	Methylation profiling by high throughput sequencing Other	Fraxinus excelsior	2	TSV	Sara Franco Ortega	Mar 03, 2025