GEO Browser - GEO

Series

Samples

Platforms

DataSets

925 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			BW
GSE81436	The ortholog of DDM1 is mainly required for CHG and CG methylation of heterochromatin and is involved in DRM2-mediated CHH methylation that targets mostly genic regions of the rice genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Oryza sativa Japonica Group	17	BAM BW CSV GFF WIG XLS SRA Run Selector	chao zhou	Jun 13, 2016
GSE252200	Reversal of C9orf72 mutation-induced transcriptional dysregulation and pathology in cultured human neurons by allele-specific excision	Methylation profiling by high throughput sequencing	Homo sapiens	5	BAM BED BW	Claire Clelland	Jan 02, 2024
GSE112479	The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	100	BB BED BW CSV TXT	Bruno Di Stefano	Oct 03, 2019
GSE118716	Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	BB BW HIC TXT VCF	Joanna Achinger-Kawecka	Dec 11, 2019
GSE48942	Compararitve Triprimate Peripheral Blood DNA Methylome	Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	3	BED BW SRA Run Selector	Gareth Wilson	Feb 01, 2014
GSE50610	Role of DNA methylation in modulating transcription factor occupancy	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	23	BED BW SRA Run Selector	Matthew T Maurano	Feb 28, 2014
GSE54693	Genome wide profiling of MBD2 binding	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	17	BED BW SRA Run Selector	H.G. Stunnenberg	Jul 03, 2014
GSE56276	Imprinted expression is different in visceral yolk sac and cystic embryoid body endoderm	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED BW TXT SRA Run Selector	Quanah J Hudson	Jul 22, 2015
GSE60106	Global loss of DNA methylation uncovers intronic enhancers in genes	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	BED BW GFF SRA Run Selector	Peggy J Farnham	Sep 10, 2014
GSE61971	Molecular profiling of mouse Dnmt3a/FLT3-ITD leukemia models	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT	Margaret Goodell	May 19, 2016
GSE63137	Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BED BW TAR TXT SRA Run Selector	Alisa Mo	Jun 17, 2015
GSE66847	Dynamics of 5-hmC in cardiac maturation and hypertrophy	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	34	BED BW	Bioinformatics Unit	Jun 21, 2016
GSE67974	Embryonic transcription is controlled by maternally defined chromatin state	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis	72	BED BW TXT SRA Run Selector	Saartje Hontelez	Dec 15, 2015
GSE69095	Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (Dnase-Hypersensitivity)	Methylation profiling by high throughput sequencing	Mus musculus	5	BED BW SRA Run Selector	MS Vijayabaskar	Feb 26, 2016
GSE69101	Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	77	BED BW	MS Vijayabaskar	Feb 25, 2016
GSE69507	Chromatin-release of the long ncRNA A-ROD is required for transcriptional activation of its target gene DKK1	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	5	BED BW	Evgenia Ntini	Oct 19, 2017
GSE71866	Novel DNA modification in mouse ESC	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	28	BED BW	Andrew Zhuo Xiao	Mar 30, 2016
GSE71941	MeDIP in mouse ESC	Methylation profiling by high throughput sequencing	Mus musculus	5	BED BW SRA Run Selector	Andrew Zhuo Xiao	Mar 30, 2016
GSE72148	DNMT3A and TET2 Compete and Cooperate to Repress Differentiation Lineage-Specific Factors in Hematopoietic Stem Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW TXT SRA Run Selector	Jianzhong Su	May 20, 2016
GSE74850	Effects of dynamic cytosine methylation on alternative pre-mRNA splicing in T lymphocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	14	BED BW FPKM_TRACKING SRA Run Selector	David Sturgill	Jan 04, 2016