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192 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			TXT
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE98101	Spatial-temporal epigenetic landscape of mouse gastrula	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	120	BW TAGALIGN TXT XLS SRA Run Selector	Naihe Jing	Oct 07, 2019
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE126958	Genome-wide methyl-cytosine competition by DNMT and TET	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	42	BED TXT SRA Run Selector	Jocelyn Charlton	Apr 21, 2020
GSE128480	Downregulation of Uhrf1 activity by TGF-β signaling controls Foxp3 methylation and iTreg cell differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Xiang Sun	Sep 08, 2019
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE132952	Methylation and gene expression data from Dnmt3b+/+, Dnmt3b-/- and Dnmt3bCI/CI embryos harvested at E11.5	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BIGWIG TXT SRA Run Selector	Rene Opavsky	Aug 19, 2019
GSE134636	Developmental Dieldrin Exposure Alters DNA Methylation at Genes Related to Dopaminergic Neuron Development and Parkinson’s Disease in Mouse Midbrain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	58	COV H5 TXT XLS SRA Run Selector	Alison I Bernstein	Jul 23, 2019
GSE136417	Maternal exposure to a mitochondrial toxicant results in life-long alterations in DNA methylation and gene expression in the offspring	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	66	BIGWIG TXT SRA Run Selector	Janine Santos	Jul 31, 2020
GSE137098	Embryonic stem cell-derived neurons as a model system for epigenome maturation during development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Third-party reanalysis	Mus musculus	53	BIGWIG GTF TXT SRA Run Selector	Ryan Lister	Jul 25, 2023
GSE139413	EED is required for Mouse Primordial Germ Cell Differentiation in the Embryonic Gonad	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	222	CGMAP TXT SRA Run Selector	Pao-Yang Chen	May 11, 2022
GSE140125	DeepH&M: Simultaneous determination of single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	24	COV TXT SRA Run Selector	Daofeng Li	Sep 10, 2020
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE146797	WGBS and RNA-seq of mouse livers and human Hep3B cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	12	TXT SRA Run Selector	Yi Wu	Apr 07, 2020
GSE147344	Multiplex CRISPR/Cas9-Based Genome Editing of Mouse Hematopoietic Stem Cells Recapitulates Acute Erythroid Leukemia and Identifies Therapeutic Targets	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	110	TXT	Chunxu Qu	Feb 10, 2021
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021
GSE151426	Temporal evolution of cellular heterogeneity during the progression to advanced, AR-negative prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	53	BW H5 TXT	Nicholas Brady	Apr 07, 2021
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE154145	Amplification of Germ Cells through Parthenogenesis Faithfully Maintain Genomic Imprinting	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	14	TXT	Chenglei Tian	Dec 22, 2021