GEO Browser - GEO

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31 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			MTX
GSE188389	Antigen cross-presentation in young tumor-bearing hosts promotes CD8 T cell terminal differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	5	BED MTX TSV	yiping fan	Feb 28, 2022
GSE262845	Antitumor progenitor exhausted CD8 T cells are sustained with TCR engagement	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BW MTX TSV TXT	Tian Mi	Apr 05, 2024
GSE144693	Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	39	BED MTX TSV	yiping fan	Apr 07, 2020
GSE212007	CDCA7-associated global aberrant DNA hypomethylation translates to localized, tissue-specific transcriptional responses	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	BW MTX TSV	Lucia Daxinger	Feb 09, 2024
GSE249143	DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling	Other Methylation profiling by high throughput sequencing	Mus musculus	60	CSV JSON MTX PNG TSV	Emily Lo	Mar 10, 2025
GSE169102	DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	187	BW COV MTX TSV TXT	Guoping Fan	May 05, 2025
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE168807	Dnmt3a-Mutant Hematopoietic Stem cells are resistant to inflammatory stress	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	56	BED MTX TSV SRA Run Selector	Grant A Challen	Feb 22, 2022
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150	BIGWIG BW MTX NARROWPEAK RDS TSV TXT	Bernard Klaas van der Veer	Apr 12, 2023
GSE137337	Epigenetic regulator function through mouse gastrulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	54	BW MTX TSV SRA Run Selector	Helene Kretzmer	Apr 07, 2020
GSE274867	Epigenetic regulators of clonal hematopoiesis control CD8 T cell stemness during immunotherapy.	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	85	BW MTX TSV TXT	Tian Mi	Oct 10, 2024
GSE188834	Establish a rapid and efficient chemical reprogramming platform	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	165	MTX TSV TXT	Yunkun Lu	May 03, 2023
GSE178628	Hypoxia induces an early primitive streak signature, enhancing spontaneous elongation and lineage representation in gastruloids	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	27	MTX NARROWPEAK TSV	Natalia Lopez-Anguita	Aug 24, 2022
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE222726	Inducible disruption of Tet genes results in myeloid malignancy, readthrough transcription, and a heterochromatin-to-euchromatin switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	36	BEDGRAPH MTX TSV TXT	Isaac F. López-Moyado	Apr 17, 2023
GSE185005	Induction of mouse totipotent stem cells by a defined chemical cocktail	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BW MTX NARROWPEAK TSV	Pengcheng Tan	May 25, 2022
GSE201665	Inhibition of mutant IDH1 promotes cycling of acute myeloid leukemia stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	32	MTX TSV	Emily Gruber	Aug 17, 2022
GSE216731	LN-stem, tumor stem, tumor terminally differentiated CD8 T cells from human kidney cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	67	CSV MTX TSV XLSX	Haydn Kissick	Nov 03, 2022
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE294032	Nuclear receptor-SINE B1 network modulates expanded pluripotency in blastoids and blastocysts.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW COV MTX TSV	Yingying Zeng	Apr 10, 2025