GEO Browser - GEO

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32 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			CSV
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE213398	Tet2 regulates Sin3a recruitment at active enhancers in embryonic stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	28	BW CSV	Meelad M Dawlaty	Jun 23, 2023
GSE227977	Comparative analysis of Tet2 catalytic deficient and knockout bone marrow over time	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BW CSV	Meelad M Dawlaty	Jun 01, 2023
GSE237800	Catalytic dependent and independent roles of Tet3 in activation of ectodermal and silencing of mesodermal programs during neuroectoderm specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BW CSV	Meelad M Dawlaty	Apr 02, 2024
GSE248933	Transcriptomic and epigenomic profiling of Tet TKO neural stem cells to study NSC specification and multipotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	36	BEDGRAPH BW CSV TXT	Meelad M Dawlaty	Jul 23, 2024
GSE158067	Single-cell multi-omics in human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation.	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	26	CSV MTX TSV TXT XLSX SRA Run Selector	Neville Dusaj	Jul 05, 2022
GSE226500	Epigenetic evolution of the Ly49 gene family [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	8	CSV TXT	Changxu Fan	Apr 20, 2024
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE200507	Genome-wide methylation analysis of murine CD4+ Th1, Th2, and Th17 cells	Methylation profiling by high throughput sequencing	Mus musculus	3	CSV TXT	Stefan Floess	Jul 19, 2022
GSE186357	Dynamics of DNA hydroxymethylation and methylation during mouse embryonic and germline development	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	209	BW CSV TXT SRA Run Selector	Fan Guo	Oct 28, 2022
GSE232491	RNA-seq and m6A-seq analysis of the control-iBAT and M14KO -iBAT, and RNA-seq analysis for the control-hBAT and M14KO-hBAT	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	21	CSV	Cheng-Wei Ju	Oct 24, 2024
GSE250137	METTL14-mediated m6A differentially orchestrates brown and white adipose tissue transcriptomes to regulate systemic metabolism	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	58	CSV	Cheng-Wei Ju	Nov 08, 2024
GSE174678	High-resolution transciptome mapping and N6-methyladenosine modification mapping of RAW264.7 cell lines treated with TCP, TBP or TIP.	Methylation profiling by high throughput sequencing	Mus musculus	8	BW CSV SRA Run Selector	Zhang Jun	Jul 01, 2021
GSE216731	LN-stem, tumor stem, tumor terminally differentiated CD8 T cells from human kidney cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	67	CSV MTX TSV XLSX	Haydn Kissick	Nov 03, 2022
GSE240863	Single cell discovery of m6A RNA modifications in the hippocampus	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	43	BED CSV RDS TXT	Magdalena Justyna Koziol	May 07, 2024
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE183675	Tet2 deficiency altered hematopoietic stem and progenitor cells ageing process	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	53	BW CSV HIC TSV TXT SRA Run Selector	Jia Li	Aug 11, 2023
GSE242724	Base-resolution m5C profiling across the mammalian transcriptome by bisulfite-free enzyme-assisted chemical labeling approach	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	104	BW CSV TXT XLS	Xiaoyu Li	Jul 11, 2024
GSE249143	DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling	Other Methylation profiling by high throughput sequencing	Mus musculus	60	CSV JSON MTX PNG TSV	Emily Lo	Mar 10, 2025
GSE162903	Base-editor-mediated multiplexed inactivation of DNA methyltransferases reveals essential roles of miRNAs in mouse gastrulation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	144	BED CSV TXT SRA Run Selector	Jiansen Lu	Apr 23, 2023