GEO Browser - GEO

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54 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			BEDGRAPH
GSE175661	Blood DNA methylation altered by Mycobacterium tuberculosis infection in mice	Methylation profiling by high throughput sequencing	Mus musculus	151	BEDGRAPH SRA Run Selector	Russell Ault	May 24, 2024
GSE136844	LINE-1 promoter methylation analysis in brain development	Methylation profiling by high throughput sequencing	Mus musculus	120	BEDGRAPH SRA Run Selector	Beatrice Bodega	Jan 17, 2021
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE205042	The mismatch-repair proteins MSH2 and MSH6 interact with the imprinting control regions through the ZFP57-KAP1 complex (RRBS)	Methylation profiling by high throughput sequencing	Mus musculus	1	BEDGRAPH	Francesco Cecere	Aug 16, 2022
GSE205043	The mismatch-repair proteins MSH2 and MSH6 interact with the imprinting control regions through the ZFP57-KAP1 complex	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	BEDGRAPH BW	Francesco Cecere	Aug 16, 2022
GSE248933	Transcriptomic and epigenomic profiling of Tet TKO neural stem cells to study NSC specification and multipotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	36	BEDGRAPH BW CSV TXT	Meelad M Dawlaty	Jul 23, 2024
GSE184267	Examining age-dependent DNA methylation patterns and gene expression in the male and female mouse hippocampus	Methylation profiling by high throughput sequencing	Mus musculus	38	BEDGRAPH SRA Run Selector	Timothy Downing	Sep 18, 2021
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE213270	Slow RNAPII transcription elongation rate, low levels of RNAPII pausing, and elevated histone H1 content at promoters associate with higher m6A deposition on nascent mRNAs	Other Methylation profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH BW	Maria Gomez	Sep 14, 2022
GSE135226	Oct4-mediated inhibition of Lsd1 activity promotes the active and primed state of pluripotency enhancers [methylRAD-seq]	Methylation profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH TSV SRA Run Selector	Humaira Gowher	Jun 29, 2020
GSE135227	Oct4-mediated inhibition of Lsd1 activity promotes the active and primed state of pluripotency enhancers	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH TSV XLSX	Humaira Gowher	Jun 29, 2020
GSE212028	Genomewide methylation analysis of B16F10 and 4T1 after Decitabine treatment with Reduced Representative Bisulfite Sequencing [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH BW	Eric Greer	Jun 30, 2024
GSE164265	Disordered N-Terminal DNMT3A Domain Is Required for Mouse Postnatal Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH BW TXT SRA Run Selector	Tianpeng Gu	Mar 21, 2022
GSE237681	Smad4 restricts injury-provoked biliary proliferation and carcinogenesis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	22	BEDGRAPH	Aram F. Hezel	Dec 07, 2023
GSE249430	Cohesin trajectories shape the epigenetic and transcriptional landscape of clustered Protocadherin genes for single neuron identities	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	80	BEDGRAPH BW H5 HIC	Lea Kiefer	Jul 29, 2024
GSE263993	Maternal circadian rhythms and metabolic plasticity in the offspring	Methylation profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH	Kenichiro Kinouchi	Jan 14, 2025
GSE290356	Gene regulatory consequecnes of loss of Kdm1a in the kidney [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH	Satya keerthi Kota	Feb 28, 2025
GSE238227	Combinational effect of the ADD domains of DNMT3A and DNMT3L on DNA methylation landscapes in mouse germ cells [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	13	BEDGRAPH	Naoki Kubo	Mar 18, 2024
GSE238228	Combinational effect of the ADD domains of DNMT3A and DNMT3L on DNA methylation landscapes in mouse germ cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	68	BEDGRAPH TXT	Naoki Kubo	Mar 17, 2024