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136 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing			SRA Run Selector
GSE58108	Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BW TAB SRA Run Selector	Harald Oey	Mar 24, 2015
GSE62631	Single-base resolution analysis of active DNA demethylation using methylase-assisted bisulfite sequencing	Methylation profiling by high throughput sequencing	Mus musculus	16	BEDGRAPH TXT SRA Run Selector	Hao Wu	Nov 02, 2014
GSE72432	Brain neuronal cell nuclei with exceptionally high levels of hydroxymethylcytosine	Methylation profiling by high throughput sequencing	Mus musculus	3	TSV SRA Run Selector	Robert J Schmitz	Jul 07, 2022
GSE72860	Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Guoqiang Zhang	Sep 10, 2015
GSE75323	Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome	Methylation profiling by high throughput sequencing	Mus musculus	16	SRA Run Selector	Alper Kucukural	Dec 17, 2015
GSE75426	Local compartment changes and regulatory landscape alterations in histone H1-depleted cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	BED TXT SRA Run Selector	Geert Geeven	Nov 30, 2015
GSE80973	Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction	Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	10	TXT SRA Run Selector	Siddharth Subhas Dey	May 03, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE83422	Methyl-seq and ChIP-seq analyses of TSPAN8-high and TSPAN8-low subpopulations of ID4-EGFP+ undifferentiated spermatogonia	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	TXT XLSX SRA Run Selector	Brian P. Hermann	Apr 24, 2017
GSE84164	Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	88	BEDGRAPH TXT SRA Run Selector	Yasuhiro Yamada	Jul 27, 2017
GSE85251	Postnatal DNA demethylation and its role in tissue maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BED TXT SRA Run Selector	Klaus H Kaestner	May 09, 2018
GSE86907	A novel requirement for Drosha in maintenance of mammalian CG methylation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	12	TSV TXT SRA Run Selector	Robert J Schmitz	Jul 27, 2017
GSE87097	High concordance between Illumina HiSeq2500 and NextSeq500 for Reduced Representation Bisulfite Sequencing (RRBS)	Methylation profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Andrew Keniry	Feb 09, 2017
GSE87623	Vitamin C induced epigenomic remodeling in IDH1 mutant acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED TXT WIG SRA Run Selector	Martin Hirst	Jul 01, 2017
GSE90509	Neuronal activity, TGFβ signaling and unpredictable chronic stress affect transcription of Gadd45 family members in vitro and in vivo [MeDIP-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	7	BED BW SRA Run Selector	Henriette Franz	Dec 31, 2017
GSE93972	Kdm2b regulates somatic reprogramming through variant PRC1 complex dependent function [ChIP-seq, MeDIP-seq]	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BW SRA Run Selector	Jiangping He	Nov 19, 2017
GSE95720	Individual retrotransposon integrants are differentially controlled by KZFP/KAP1-dependent histone methylation, DNA methylation and TET-mediated hydroxymethylation in naïve embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BED PILEUP TXT SRA Run Selector	Julien Duc	Feb 28, 2018
GSE98186	Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells in vivo [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Hyun Jung Park	Apr 25, 2018
GSE98254	Rif1 Promotes a Repressive Chromatin State to Safeguard Against Endogenous Retrovirus Activation [MeDIP-seq]	Methylation profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH SRA Run Selector	Pishun Li	Sep 19, 2017
GSE100262	Base-resolution analysis of DNA methylation patterns downstream of Dnmt3a in mouse naïve B cells	Methylation profiling by high throughput sequencing	Mus musculus	6	BED BIGWIG SRA Run Selector	Paul A Wade	Jan 19, 2018