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136 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing			SRA Run Selector
GSE58108	Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	22	BW TAB SRA Run Selector	Harald Oey	Mar 24, 2015
GSE72860	Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Guoqiang Zhang	Sep 10, 2015
GSE75426	Local compartment changes and regulatory landscape alterations in histone H1-depleted cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	BED TXT SRA Run Selector	Geert Geeven	Nov 30, 2015
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE84164	Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	88	BEDGRAPH TXT SRA Run Selector	Yasuhiro Yamada	Jul 27, 2017
GSE85251	Postnatal DNA demethylation and its role in tissue maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BED TXT SRA Run Selector	Klaus H Kaestner	May 09, 2018
GSE86907	A novel requirement for Drosha in maintenance of mammalian CG methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	12	TSV TXT SRA Run Selector	Robert J Schmitz	Jul 27, 2017
GSE87623	Vitamin C induced epigenomic remodeling in IDH1 mutant acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED TXT WIG SRA Run Selector	Martin Hirst	Jul 01, 2017
GSE95720	Individual retrotransposon integrants are differentially controlled by KZFP/KAP1-dependent histone methylation, DNA methylation and TET-mediated hydroxymethylation in naïve embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BED PILEUP TXT SRA Run Selector	Julien Duc	Feb 28, 2018
GSE101610	Transcriptional and epigenetic profiling of aged mouse SVZ-derived neural stem / progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	TXT SRA Run Selector	Felix Krueger	Mar 06, 2018
GSE101675	Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	19	BED BW SRA Run Selector	Hendrik Marks	Nov 24, 2018
GSE105051	Ancestral perinatal obesogen exposure results in a transgenerational thrifty phenotype in mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	40	TXT SRA Run Selector	Raquel Chamorro-Garcia	Nov 10, 2017
GSE108155	Differences in cell cycle status underlie transcriptional heterogeneity in the HSC compartment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	TXT XLSX SRA Run Selector	Nicolas Rapin	Jun 21, 2018
GSE109262	Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	244	TSV TXT SRA Run Selector	Felix Krueger	Jan 17, 2018
GSE109965	Analysis of genetically diverse macrophages reveals local and domain-wide mechanisms that control transcription factor binding and function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	294	TXT SRA Run Selector	Christopher Glass	May 17, 2018
GSE111024	Extensive recovery of embryonic enhancer and gene memory stored in hypomethylated enhancer DNA.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	52	BW TXT SRA Run Selector	Ramesh Shivdasani	Mar 14, 2019
GSE111172	Genome-wide identification of distinct target loci for de novo DNA methylation by DNMT3A and DNMT3B during mammalian development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	26	BEDGRAPH TXT SRA Run Selector	Yasuhiro Yamada	May 13, 2020
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	BW MTX NARROWPEAK TAR TSV TXT SRA Run Selector	Mark F Sabbagh	Sep 06, 2018
GSE112320	Comprehensive analysis of H3K9me2 oocytes, together with DNA methylation and expression analysis of G9a conditional KO oocytes and maternal KO preimplantation embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BEDGRAPH TXT SRA Run Selector	Wan Kin Au Yeung	Apr 02, 2019
GSE121671	Tet inactivation disrupts YY1 binding and long-range chromatin interactions to cause developmental defects in embryonic heart	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	23	BW HIC TXT SRA Run Selector	Jia Li	Aug 07, 2019