GEO Browser - GEO

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130 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by genome tiling array	Mus musculus		TXT
GSE42478	Defining a molecular roadmap of cellular reprogramming into iPS cells	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	61	BIGWIG CEL PAIR TXT	Ben S. Wittner	Dec 20, 2012
GSE86059	The rate of ageing-associated DNA methylation dynamics is a molecular readout of lifespan variation amongst mammalian species	Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Canis lupus familiaris Heterocephalus glaber Homo sapiens Macaca mulatta Mus musculus	84	TXT	Robert Lowe	Jan 17, 2018
GSE173330	Methylation clocks for age estimation in toothed whales and dolphins	Methylation profiling by genome tiling array	Cephalorhynchus commersonii Delphinapterus leucas Delphinus delphis Globicephala macrorhynchus Homo sapiens Mus musculus Orcinus orca Phocoena phocoena Rattus norvegicus Sagmatias obliquidens Steno bredanensis Tursiops truncatus	545	IDAT TXT	Steve Horvath	Apr 27, 2021
GSE21662	A tripartite paternally methylated region within the Gpr1-Zdbf2 imprinted domain on mouse chromosome 1 identified by meDIP-on-chip	Methylation profiling by genome tiling array	Homo sapiens Mus musculus	76	TXT	Hitoshi Hiura	May 05, 2010
GSE28033	Epigenetic Regulation of IL17RC in Age-related Macular Degeneration	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens Mus musculus	9	CEL PAIR TXT	Lai Wei	Mar 22, 2011
GSE39490	Helicobacter pylori-mediated Epigenetic Dysregulation of FOXD3 Tumor-suppressive Cascade In Gastric Carcinogenesis [ChIP]	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Homo sapiens Mus musculus	4	TXT	Alfred S Cheng	Dec 28, 2012
GSE39600	Helicobacter pylori-mediated Epigenetic Dysregulation of FOXD3 Tumor-suppressive Cascade In Gastric Carcinogenesis	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Homo sapiens Mus musculus	14	GPR TXT	Alfred S Cheng	Dec 28, 2012
GSE42119	DNA methylation changes are a late event in Acute Promyelocytic Leukemia and coincide with loss of transcription factor binding	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Mus musculus	61	TXT	Christian Rohde	Nov 08, 2012
GSE43226	Utility of HM450 BeadArray on Mouse Samples	Methylation profiling by genome tiling array	Homo sapiens Mus musculus	15	TXT	Nicholas C Wong	Jun 21, 2013
GSE45342	Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	31	BAR CEL TXT	Scott J. Diede	Oct 10, 2013
GSE49177	Array-based assay detects genome-wide 5-methylcytosine and 5-hydroxymethlycytosine in non-human primates and mice	Methylation profiling by genome tiling array	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	61	TXT	Pankaj Chopra	Feb 06, 2014
GSE55426	Domains of genomewide gene expression dysregulation in Down syndrome	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	42	BW PAIR TXT	Audrey Letourneau	Apr 08, 2014
GSE63981	Mouse-human experimental epigenetic analysis unmasks dietary targets and genetic liability for diabetic phenotypes	Methylation profiling by genome tiling array	Homo sapiens Mus musculus	86	TXT XYS	Andrew P Feinberg	Jan 06, 2015
GSE67767	DNMT1 KNOCKOUT IN MURINE LIVER (methylation)	Methylation profiling by genome tiling array	Homo sapiens Mus musculus	18	TXT	Jesper B Andersen	Apr 01, 2016
GSE68387	IMI MARCAR Project: towards novel biomarkers for cancer risk assessment	Expression profiling by array Non-coding RNA profiling by array Methylation profiling by genome tiling array	Homo sapiens Mus musculus Rattus norvegicus synthetic construct	2666	CEL CSV PAIR TXT	Jonathan Moggs	Apr 29, 2015
GSE69972	Chromosome-wide DNA unmethylome profiling examining human chromosomes 2, 9, 19 and mouse chromosomes 1, 9, 19	Other Methylation profiling by genome tiling array	Homo sapiens Mus musculus	170	CEL TXT	Arturas Petronis	Mar 25, 2016
GSE69979	Epigenetics of lactose intolerance and lactase persistence	Other Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	557	CEL TXT	Arturas Petronis	Mar 25, 2016
GSE87424	Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	167	BED CSV IDAT TXT XLSX	Gary L Johnson	Jan 20, 2017
GSE104216	The rate of ageing-associated DNA methylation dynamics is a molecular readout of lifespan variation amongst mammalian species [TC1_450k]	Methylation profiling by genome tiling array	Homo sapiens Mus musculus	6	TXT	Robert Lowe	Jan 17, 2018
GSE120558	Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	66	BED BIGWIG COV IDAT TXT	Duncan Sproul	Nov 26, 2018