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860 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TSV
GSE71196	Identification and characterization of MCF01A circular RNAs [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV TXT SRA Run Selector	Yehoshua Enuka	Dec 17, 2015
GSE118202	Human lineage tracing enabled by mitochondrial mutations and single cell genomics [TF1_barcoding_ATAC]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV SRA Run Selector	Caleb Lareau	Feb 28, 2019
GSE143197	Inference and effects of barcode multiplets in droplet-based single-cell assays	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV SRA Run Selector	Caleb Lareau	Jan 07, 2020
GSE148187	Re-localization of CENP-A at centromeres upon depletion and re-expression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV SRA Run Selector	Riccardo Gamba	Sep 22, 2020
GSE148509	High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CRC_scATACseq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV SRA Run Selector	Caleb Lareau	Jul 13, 2020
GSE154027	A single-cell chromatin accessibility map of pulmonary alveologenesis in humans and mice	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	1	BED TSV XLSX	Thu Duong	Dec 31, 2020
GSE155255	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [Patient scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV SRA Run Selector	Caleb Lareau	Dec 31, 2021
GSE178453	Single nucleus pituitary transcriptomic and epigenetic landscape reveals human stem cell heterogeneity with diverse regulatory mechanisms (snMultiome)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	1	H5 TSV SRA Run Selector	Michel A Zamojski	Jan 10, 2022
GSE179326	Gene expression profiling study by RNA-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED MTX TSV SRA Run Selector	Jong Hwan Kim	Sep 20, 2022
GSE191282	Modeling human extraembryonic mesoderm cells using naive pluripotent stem cells [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED LOOM TSV	Vincent Pasque	Aug 01, 2022
GSE197033	Clonal expansion and epigenetic inheritance shape long-lasting NK cell memory [scATAC in vitro]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	CSV TSV TXT	Timo Rückert	Sep 05, 2022
GSE203567	Global genome decompaction leads to stochastic activation of gene expression as a first step toward fate commitment in human hematopoietic cells [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED CSV H5 TSV	Andràs Pàldi	May 26, 2022
GSE205180	Spatial epigenome-transcriptome co-profiling of mammalian tissues [Human ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TAR TSV	Di Zhang	Jan 29, 2023
GSE215758	Temporal chromatin accessibility changes define transcriptional states essential for osteosarcoma metastasis [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	CSV H5 TSV	Peter Scacheri	Sep 18, 2023
GSE216404	Multi-scale chromatin footprinting reveals wide-spread alterations to the structure of DNA regulatory elements [SHARE-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED MTX TSV	Jason Buenrostro	Mar 29, 2023
GSE230657	Highly efficient and rapid generation of human pluripotent stem cells by chemical reprogramming (scATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TBI TSV	Yulin Lyu	Apr 26, 2023
GSE263522	Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [snMultiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	MTX TSV	Clémence Henon	Apr 15, 2024
GSE56279	Co-transcriptional histone H2B monoubiquitylation is tightly coupled with RNA polymerase II elongation rate	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TSV SRA Run Selector	Dror Hollander	Jul 15, 2014
GSE71197	Identification and characterization of MCF01A circular RNAs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TSV TXT	Yehoshua Enuka	Dec 17, 2015
GSE115215	Human lineage tracing enabled by mitochondrial mutations and single cell genomics [CC100_ATAC]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TSV SRA Run Selector	Caleb Lareau	Feb 28, 2019