GEO Browser - GEO

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35 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BIGWIG
GSE221300	Aberrant cell state plasticity mediated by developmental reprogramming precedes colorectal cancer initiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BIGWIG BW MTX TSV	Nilay Sethi	Apr 03, 2023
GSE224832	Active repression of cell fate plasticity by PROX1 safeguards hepatocyte identity and prevents liver tumorigenesis.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	104	BIGWIG TSV	Moritz Mall	Dec 18, 2024
GSE207058	BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	BEDGRAPH BIGWIG WIG XLSX	Elena Pugacheva	Jan 03, 2024
GSE203322	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BIGWIG BW MTX RESULTS TSV TXT	Masaki Nomura	Oct 31, 2023
GSE245030	CPSF6-RARγ Interacts with HDAC3 to Promote Myeloid Transformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	57	BIGWIG BW MTX TSV	meng shan	Oct 24, 2024
GSE221345	Cdc73 protects Notch-induced T-cell leukemia cells from DNA damage and mitochondrial stress	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BED BIGWIG NARROWPEAK TXT	Brian Magnuson	Aug 29, 2023
GSE221339	Cdc73 protects Notch-induced T-cell leukemia cells from DNA damage and mitochondrial stress [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BED BIGWIG TXT	Brian Magnuson	Aug 30, 2023
GSE233085	Chemically induced revitalization of damaged hepatocytes for regenerative liver repair	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	BIGWIG MTX TSV	pengyan lin	Nov 20, 2023
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	107	BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE241347	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates leukemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	291	BED BIGWIG BROADPEAK NARROWPEAK TXT	Xiaoyang Dou	Jul 24, 2024
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	76	BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE195497	EVI1 drives leukemogenesis through aberrant activation of ERG	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	38	BIGWIG TXT	Florian Andersch	Oct 11, 2022
GSE202730	Effect of trans-vaccenic acid(TVA) treatment on gene expression of mouse CD8+ T cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BIGWIG	Matthew Oliver Ross	May 08, 2023
GSE228805	Engrailed-1 Promotes Pancreatic Cancer Metastasis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BIGWIG TXT	Chang-il Hwang	Dec 19, 2023
GSE183876	Epigenetic basis of oncogenic-Kras mediated epithelial-cellular proliferation and plasticity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	68	BIGWIG NARROWPEAK TSV	Preetish Kadur Lakshminarasimha Murthy	Dec 22, 2021
GSE186589	Epigenetic dysregulation from chromosomal transit in micronuclei	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	187	BED BIGWIG BW TDF TXT	Albert S Agustinus	Mar 13, 2023
GSE266750	GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	75	BED BIGWIG MCOOL TXT	Feng Yue	Dec 19, 2024
GSE209627	Genomic binding of NF-Y in mouse and human cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BIGWIG	Diletta Dolfini	Aug 01, 2024
GSE131098	Hammer-seq to measure kinetics of DNA methylation maintenance in HeLa cells	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	126	BIGWIG TXT SRA Run Selector	Zhuqiang Zhang	Jun 26, 2020