GEO Browser - GEO

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134 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BW
GSE118963	The p30 isoform of CEBPA uncovers a silent enhancer to drive the expression of the tumor promotive factor CD73 in CEBPA mutant AML	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	35	XLSX BW SRA Run Selector	Janus Schou Jakobsen	Jul 30, 2019
GSE149031	Che-1/AATF-induced transcriptionally active chromatin promotes cell proliferation in Multiple Myeloma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	XLSX TXT TSV BW BROADPEAK BED SRA Run Selector	Maurizio Fanciulli	Dec 08, 2020
GSE158736	Complex-dependent histone acetyltransferase activity of KAT8 determines its role in transcriptional regulation and cellular homeostasis (ChIP-sequecing data)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	39	XLSX BW SRA Run Selector	Aliaksandra Radzisheuskaya	Feb 28, 2021
GSE207163	Transcriptional repression by a secondary DNA binding surface of DNA topoisomerase I safeguards against hypertranscription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	62	XLSX TXT RESULTS BW BED	Zhenhua hu	May 29, 2023
GSE223370	G-quadruplex DNA structure is a positive regulator of MYC transcription	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	243	XLSX TXT BW	Larry Melidis	Feb 06, 2024
GSE178869	Elucidation of differential TF binding and epigenome in response to MYCi975.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	154	XLS TXT CSV BW SRA Run Selector	Debu Chakravarti	Apr 27, 2022
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	WIG BW BED	Jian Xu	Feb 20, 2020
GSE200580	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	WIG BW	Luke Thomas Isbel	Apr 30, 2023
GSE200586	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	174	WIG BW	Luke Thomas Isbel	Apr 29, 2023
GSE210190	Paediatric Glioma Histone H3.3 K27M/G34R Mutations Drive Abnormalities in Phase-Separated PML Nuclear Bodies.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	WIG BW	Hsiao Phin Joanna Voon	Nov 19, 2023
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	TXT BW BEDGRAPH SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE95374	Selective silencing of euchromatic L1s revealed by genome-wide screens for L1 regulators	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	104	TXT BW SRA Run Selector	Nian Liu	Dec 06, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	TXT NARROWPEAK HIC BW BEDGRAPH BED SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE111003	Transcriptomes and Epigenomes of Hemin exposed trained monocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	94	TXT BW	Cristian Ruiz-Moreno	Feb 21, 2020
GSE111009	Cell type-dependent control of enhancer and p53 transcriptional activity by p63	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	98	TXT NARROWPEAK BW BEDGRAPH BED SRA Run Selector	Morgan A Sammons	Feb 11, 2019
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	TXT TDF HIC BW SRA Run Selector	Lei Tian	Aug 11, 2020
GSE121671	Tet inactivation disrupts YY1 binding and long-range chromatin interactions to cause developmental defects in embryonic heart	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	23	TXT HIC BW SRA Run Selector	Jia Li	Aug 07, 2019
GSE124190	PLZF limits enhancer activity during hematopoietic progenitor aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	TXT BW BIGWIG SRA Run Selector	Mathilde Poplineau	Dec 21, 2018
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	47	TXT TSV MTX BW SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE131334	Oncogenic CDK13 Mutations Impede Nuclear RNA Surveillance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	87	TXT BW	Richard A Young	Apr 21, 2023