GEO Browser - GEO

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29 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BIGWIG
GSE202211	Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia II	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BIGWIG	Masaki Nomura	Jun 21, 2022
GSE60604	An alternative pluripotent state confers interspecies chimaeric competency [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BIGWIG SRA Run Selector	Christopher Benner	May 06, 2015
GSE221300	Aberrant cell state plasticity mediated by developmental reprogramming precedes colorectal cancer initiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BIGWIG BW MTX TSV	Nilay Sethi	Apr 03, 2023
GSE202527	Acquired anoikis resistance mediates enhancer-driven subtype plasticity in pancreatic cancer [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	22	BIGWIG	Jae Seok Roe	Apr 04, 2023
GSE209627	Genomic binding of NF-Y in mouse and human cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BIGWIG	Diletta Dolfini	Aug 01, 2024
GSE100647	Che-1/AATF sustains cell growth and global transcription in Multiple Myeloma through the maintenance of open chromatin structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BIGWIG BW	Matteo Pallocca	Jun 07, 2021
GSE100400	Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	31	BIGWIG SRA Run Selector	Jan Postberg	Apr 30, 2018
GSE233085	Chemically induced revitalization of damaged hepatocytes for regenerative liver repair	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	BIGWIG MTX TSV	pengyan lin	Nov 20, 2023
GSE94804	Genome-wide maps of chromatin state in neurosphere cells and breast cancer cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BIGWIG SRA Run Selector	Mark A Zarnegar	Feb 23, 2017
GSE124190	PLZF limits enhancer activity during hematopoietic progenitor aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG BW TXT SRA Run Selector	Mathilde Poplineau	Dec 21, 2018
GSE138460	An androgen receptor switch underlies lineage infidelity to drive neuroendocrine prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG BW TXT	Amina Zoubeidi	Jul 15, 2021
GSE154675	PHF6 Interacts with LMO2 During Normal Haematopoiesis and in Leukaemia and Regulates the Level of Gene Expression and Genome Integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG TXT SRA Run Selector	Maarten Hoogenkamp	Dec 31, 2024
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE171599	MacroH2A histone variants modulate enhancer activity to repress oncogenic programs and cellular reprogramming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	44	BED BIGWIG BW H5 SRA Run Selector	Alexandre Gaspar-Maia	Feb 21, 2023
GSE244929	Active regulatory elements recruit cohesin to establish cell-specific chromatin domains.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BIGWIG BW	Emily Georgiades	Oct 13, 2023
GSE112417	Histone Variant H2A.Z Defines Cell Identity in Vascular Smooth Muscle Cells as Revealed by Single-Cell Transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG CSV TXT SRA Run Selector	Li Wang	Jun 08, 2018
GSE163142	Retinoic Acid Signaling Drives Differentiation towards Enterocytes in Colorectal Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BIGWIG CSV TXT SRA Run Selector	Michiel Vermeulen	Nov 26, 2021
GSE256232	Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BED BIGWIG	Ruitu Lyu	Jun 20, 2024
GSE183876	Epigenetic basis of oncogenic-Kras mediated epithelial-cellular proliferation and plasticity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	68	BIGWIG NARROWPEAK TSV	Preetish Kadur Lakshminarasimha Murthy	Dec 22, 2021
GSE202534	Anoikis resistance drives transcriptional plasticity in pancreatic cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	74	BIGWIG	Jae Seok Roe	Apr 04, 2023