GEO Browser - GEO

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62 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BED
GSE199801	A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	60	BED BW CSV	Emilia Dimitrova	Dec 22, 2022
GSE250519	A mucus production programme promotes classical pancreatic ductal adenocarcinoma	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED BW	Olaf Klingbeil	Jan 24, 2024
GSE126151	A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BED TXT SRA Run Selector	Barbara Hummel	Nov 08, 2019
GSE89416	ATAC-seq analysis in 5F cells and AGM cells with EZH1 depletion	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	7	BED WIG SRA Run Selector	Melissa Kinney	Jan 01, 2018
GSE99173	ATAC-seq analysis in K562 cells with or without HBD-1k region knockout, mouse KH2 embryonic stem cells (ESCs) and differentiated KH2 Embryoid bodies (EBs)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BED WIG SRA Run Selector	Jian Xu	Aug 24, 2017
GSE240030	ATRX guards against aberrant differentiation in mesenchymal progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	165	BED BW NARROWPEAK	Douglas Barrows	Mar 13, 2024
GSE186349	Acetylation of histone H2B marks active enhancers and predicts CBP/p300 target genes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BED BW SRA Run Selector	Chunarum Choudhary	Feb 23, 2023
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	BED BW WIG	Jian Xu	Feb 20, 2020
GSE179705	Cancer-associated fibroblasts recapitulate phenotypes and functions across tumor types and species	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	BED MTX TSV SRA Run Selector	Michael Januszyk	Feb 01, 2023
GSE111009	Cell type-dependent control of enhancer and p53 transcriptional activity by p63	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	98	BED BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Morgan A Sammons	Feb 11, 2019
GSE99178	ChIP-seq analysis of BRD4 and RNAPII in K562 cells treated with DMSO or JQ1, NUP98 and NUP153 in K562 cells, and H3K27ac in mouse KH2 undifferentiated embryonic stem cells (ESCs) or differentiated embryonic bodies (EBs)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BED WIG SRA Run Selector	Jian Xu	Aug 24, 2017
GSE99177	ChIP-seq analysis of dCas9 chromatin occupancy by dCas9/sgRNA-mediated CAPTURE	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	61	BED TXT WIG SRA Run Selector	Jian Xu	Aug 24, 2017
GSE149031	Che-1/AATF-induced transcriptionally active chromatin promotes cell proliferation in Multiple Myeloma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED BROADPEAK BW TSV TXT XLSX SRA Run Selector	Maurizio Fanciulli	Dec 08, 2020
GSE139950	Chromatin-accessibility estimation from single-cell ATAC data with scOpen	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED MTX TSV SRA Run Selector	Zhijian Li	Sep 17, 2021
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023
GSE89418	EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BED TXT WIG	Melissa Kinney	Jan 01, 2018
GSE186589	Epigenetic dysregulation from chromosomal transit in micronuclei	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	187	BED BIGWIG BW TDF TXT	Albert S Agustinus	Mar 13, 2023
GSE98843	Epigenome analysis reveals novel aspects of ILC2 activation and supports a pathogenic role in asthma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BED TXT SRA Run Selector	Ralph Stadhouders	Mar 14, 2018
GSE164360	Epigenomic Activation of Enhancers in Granule Cell Precursors by CHARGE Syndrome Protein CHD7 Regulates Gyrification of the Mammalian Cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	104	BED TXT XLSX SRA Run Selector	Naveen Reddy	Apr 07, 2021