GEO Browser - GEO

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26 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta		BW
GSE233467	2-hydroxypropyl-beta-cyclodextrin treatment induces modest immune activation in healthy rhesus macaques	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	31	BW NARROWPEAK	Jason Brenchley	Jun 12, 2023
GSE233449	2-hydroxypropyl-beta-cyclodextrin treatment induces modest immune activation in healthy rhesus macaques [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	16	BW NARROWPEAK	Jason Brenchley	Jun 12, 2023
GSE163177	3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	18	BED BEDPE BW HIC NARROWPEAK TXT SRA Run Selector	Yuting Liu	Dec 15, 2020
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE130570	Chromatin Accessibility and Transcription Dynamics During In Vitro Astrocyte Differentiation of Huntington’s Disease Monkey Pluripotent Stem Cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	40	BW SRA Run Selector	Isaac Kremsky	Jun 08, 2020
GSE175679	Distinct nuclear compartment-associated genome architecture in the developing mammalian brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	62	BED BW H5 SRA Run Selector	Tomasz Nowakowski	May 28, 2021
GSE67978	Epigenomic annotation of gene regulatory alterations during evolution of the primate brain	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	98	BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Jan 13, 2016
GSE158934	Evolution of regulatory signatures in primate cortical neurons at cell-type resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Pan troglodytes	46	BW	Stella Dracheva	Oct 03, 2020
GSE158931	Evolution of regulatory signatures in primate cortical neurons at cell-type resolution [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Pan troglodytes	32	BW XLSX SRA Run Selector	Stella Dracheva	Oct 03, 2020
GSE60838	Evolutionary changes in promoter and enhancer activity during corticogenesis (non-human)	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Mus musculus	39	BED BW SRA Run Selector	Steven K Reilly	Mar 06, 2015
GSE63649	Evolutionary changes in promoter and enhancer activity during human corticogenesis	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	63	BED BW	Steven K Reilly	Mar 06, 2015
GSE130871	Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Pan troglodytes	49	BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Dec 20, 2019
GSE216917	Human gene regulatory evolution is driven by divergence in cis and trans	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta	22	BED BW TSV	Tyler J Hansen	Dec 22, 2023
GSE147724	Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Mus musculus	19	BW SRA Run Selector	Tianxiong Yu	Oct 24, 2020
GSE106580	Nucleosome profiles for mammalian tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Sus scrofa Tupaia belangeri	39	BW	Yumei Li	Aug 06, 2018
GSE106578	Nucleosome profiles for mammalian tissues [Mnase-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Sus scrofa Tupaia belangeri	21	BW SRA Run Selector	Yumei Li	Aug 07, 2018
GSE246351	Ongoing Production of Tissue-Resident Macrophages from Hematopoietic Stem Cells in Healthy Adult Macaques	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	13	BW NARROWPEAK	Jason Brenchley	Feb 14, 2024
GSE246348	Ongoing Production of Tissue-Resident Macrophages from Hematopoietic Stem Cells in Healthy Adult Macaques [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	9	BW NARROWPEAK	Jason Brenchley	Feb 14, 2024
GSE135791	Pachytene piRNA Genes Are Rapidly Diverging Among Modern Humans	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	72	BW NARROWPEAK TXT SRA Run Selector	Tianxiong Yu	Dec 23, 2019
GSE160247	Regulatory diversity contributes to divergent transcriptional response to dietary changes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	20	BW SRA Run Selector	Kevin Richard Costello	Apr 01, 2021