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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterXenopus tropicalis
GSE30146
HEB and E2A function as SMAD/FOXH1 cofactors
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
2 Se-Jin Yoon Aug 23, 2011
GSE82153
CDK9 knock-out Xenopus tropicalis
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
2 Saartje Hontelez Feb 02, 2019
GSE158331
Tissue disaggregation and isolation of specific cell types from transgenic Xenopus appendages for transcriptional analysis by FACS
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
2 Anneke Dixie Kakebeen Sep 23, 2020
GSE214697
DNA methylation dynamics underlie metamorphic gene regulation programs in Xenopus tadpole brain [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
2 Robert J Denver Oct 05, 2022
GSE21482
Nucleotide composition-linked divergence of vertebrate core promoter architecture
  • Link icon Xenopus tropicalis
3 Gert Jan Veenstra Dec 30, 2010
GSE197867
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [ATAC-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
3 Chuihui Hou Jan 26, 2023
GSE240549
Molecular basis of Urostyle development [ATAC-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
3 Gayani Senevirathne Oct 01, 2024
GSE14025
A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos
  • Link icon Xenopus tropicalis
4 Gert Jan Veenstra Sep 15, 2009
GSE53652
Genome-wide view of TGFb/Foxh1 regulation of the early mesendoderm program [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
5 William Chiu Nov 07, 2014
GSE218515
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [ChIP-Seq2]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
8 Chuihui Hou Jan 26, 2023
GSE226463
Pol III chromatin immunoprecipitation-sequencing (ChIP-seq) of Xenopus tropicalis blastula embryos
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
8 Emil Karaulanov Aug 29, 2024
GSE53654
Genome-wide view of TGFb/Foxh1 regulation of the early mesendoderm program
  • Link icon Xenopus tropicalis
9 William Chiu Nov 07, 2014
GSE48560
In vivo T-box Transcription Factor Profiling Reveals Joint Regulation of Embryonic Neuro-mesodermal Bipotency.
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
10 George E. Gentsch Sep 19, 2013
GSE15556
Systematic and single cell analysis of Xenopus Piwi-interacting RNAs and Xiwi
11 Nelson C Lau Sep 01, 2009
GSE56169
E2a is necessary for Smad2/3 dependent transcription and the direct repression of lefty
  • Link icon Xenopus tropicalis
11 Andrea E. Wills Aug 01, 2014
GSE85273
Foxh1 marks the embryonic genome prior to the activation of the mesendoderm gene regulatory program
  • Link icon Xenopus tropicalis
11 Rebekah M Charney Mar 30, 2017
GSE172076
Occupancies of tissue-specific cis-regulatory modules by Spemann-Mangold organizer-specific transcription factors for embryonic head specification
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
11 Aaron Zorn Apr 15, 2021
GSE199671
Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
11 Jessen V Bredeson Mar 30, 2022
GSE161718
Thyroid hormone receptor α controls larval intestinal epithelial cell death by regulating the CDK1 pathway
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
12 Ryan Dale Jul 19, 2022
GSE193363
ChIP sequencing of wild-type and TRα (-/-) hindlimb with and without T3 Treatment
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
12 Ryan Dale Jul 19, 2022