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1199 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster		BIGWIG
GSE65837	Zelda determines chromatin accessibility during the Drosophila maternal-to-zygotic transition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BIGWIG TXT SRA Run Selector	Melissa M Harrison	Aug 06, 2015
GSE81090	Cutoff suppresses RNA polymerase II termination to ensure expression of piRNA precursors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	14	BIGWIG TAB SRA Run Selector	Maria Ninova	May 05, 2016
GSE93100	Mrg15 allosterically activates Ash1’s H3K36 methyltransferase activity and facilitates Ash1’s trithorax group protein function in Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	21	BIGWIG TXT SRA Run Selector	Zhuqiang Zhang	Oct 04, 2017
GSE103582	piRNA-mediated regulation of transposon alternative splicing in soma and germline	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	20	BEDGRAPH BIGWIG SRA Run Selector	Felipe Karam Teixeira	Dec 06, 2017
GSE116365	Nuclear actin is required for transcription during Drosophila oogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	30	BIGWIG TSV	Maria Sokolova	Aug 01, 2018
GSE120220	Harnessing enhanced nucleotide chemistry and toehold nanotechnology to reveal lncRNA spreading on chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	34	BED BEDGRAPH BIGWIG	Matthew D Simon	Mar 11, 2020
GSE135815	Evolutionary conserved NSL complex/BRD4 axis controls transcription activation via histone acetylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	84	BIGWIG	Asifa Akhtar	Mar 13, 2020
GSE141377	CDK12 and CDK13	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	124	BIGWIG BW CSV GFF TDF TSV	Zheng Fan	Apr 29, 2020
GSE142533	The transcription factor M1BP targets CP190 to chromatin to regulate transcription and chromatin insulator activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	52	BED BIGWIG NARROWPEAK	Elissa Lei	Oct 27, 2020
GSE146382	Ush regulates macrophage-specific gene expression, fatty acid metabolism and cell cycle progression and cooperates with dNuRD to orchestrate hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	21	BIGWIG TXT SRA Run Selector	Robert Liefke	Jan 25, 2021
GSE156847	The negative elongation factor NELF promotes active transcription of Drosophila ecdysone-dependent genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	53	BIGWIG TXT SRA Run Selector	Nadezhda E Vorobyeva	Jan 10, 2021
GSE156897	The NSL complex is required for telomere maintenance and primary piRNA biogenesis from telomeric clusters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	26	BIGWIG BW CSV SRA Run Selector	Asifa Akhtar	Aug 26, 2021
GSE157796	Aging ISCs and Polycomb KD ISCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	61	BIGWIG TSV	Michal Pawlak	Mar 19, 2021
GSE160931	Fruitless decommissions regulatory elements to implement cell-type-specific neuronal masculinization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	16	BED BIGWIG TXT	Eleanor Josephine Clowney	Jan 22, 2021
GSE166714	Segmental chromatin states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	36	BIGWIG CSV SRA Run Selector	Ryan Loker	May 18, 2021
GSE168894	Role of Su(Hw) in DNA amplification in Drosophila ovaries	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	39	BIGWIG SRA Run Selector	Nadezhda E Vorobyeva	Aug 22, 2021
GSE182204	Acetyl-methyllysine marks chromatin at active transcription start sites	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	68	BIGWIG CSV NARROWPEAK TDF SRA Run Selector	Matthew Simon	Jul 21, 2023
GSE184454	Transcription factor paralogs orchestrate alternative gene regulatory networks by context-dependent cooperation with multiple cofactors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster synthetic construct	61	BIGWIG PDF TXT SRA Run Selector	Siqian Feng	May 23, 2022
GSE186506	H3K36 Dimethylation Shapes the Epigenetic Interaction Landscape by Directing Repressive Chromatin Modifications in Embryonic Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	28	BIGWIG BW TDF SRA Run Selector	Carmen Rivas	Mar 28, 2022
GSE194036	ChIATAC is an efficient strategy for multi-omics mapping of 3D epigenomes from low-cell inputs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	30	BIGWIG HIC TXT SRA Run Selector	Chia-Lin Wei	Dec 23, 2022