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25 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae		SGR
GSE31466	Centromere-Like Regions in Budding Yeast	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	13	BED SGR TXT SRA Run Selector	Raymond K Auerbach	Jan 18, 2013
GSE57619	HDACs act on ribosomal DNA to control the yeast replication program and the competition between origins for limiting initiation factors	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae Saccharomyces cerevisiae W303	52	BED CEL SGR	Philippe Pasero	May 14, 2014
GSE82082	A study of Mediator subunit enhancer-promoter binding	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	16	BIGWIG SGR SRA Run Selector	Natalia Petrenko	Oct 31, 2016
GSE93190	Evidence that Mediator is essential for Pol II transcription but not a required component of the preinitiation complex in vivo	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	47	BIGWIG SGR SRA Run Selector	Natalia Petrenko	Jul 13, 2017
GSE122734	Requirements for preinitiation complex formation in vivo	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	56	BIGWIG SGR SRA Run Selector	Natalia Petrenko	Feb 27, 2019
GSE121543	The nucleosome acidic patch directly interacts with subunits of the Paf1 and FACT complexes and controls chromatin architecture in vivo	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	12	BW SGR SRA Run Selector	Karen M. Arndt	Jun 11, 2019
GSE141676	Rapid and Inexpensive Preparation of Genome-Wide Nucleosome Footprints from Model and Non-Model Organisms	Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa Saccharomyces cerevisiae Schizosaccharomyces pombe	13	FASTA GTF SGR SRA Run Selector	Jeffrey N McKnight	Dec 10, 2019
GSE57617	HDACs act on ribosomal DNA to control the yeast replication program and the competition between origins for limiting initiation factors [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	10	SGR SRA Run Selector	Philippe Pasero	May 14, 2014
GSE67150	Characterization of H3 density, H3 or H4 acetylation, Rpd3 binding, TFIIB binding, and Rpb3 (pol II) binding in wild type and rpd3 cells as they transition from logarithmic growth to diauxic shift to quiescence [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	65	SGR SRA Run Selector	Jeffrey N McKnight	Aug 20, 2015
GSE67151	Rpd3 drives transcriptional quiescence	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	63	SGR TXT	Jeffrey N McKnight	Aug 20, 2015
GSE69065	Post-licensing specification of eukaryotic replication origins by facilitated Mcm2-7 sliding along DNA	Other Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	8	SGR SRA Run Selector	Iestyn Whitehouse	Jan 07, 2016
GSE81028	Nucleosome occupancy as a novel chromatin parameter for replication origin functions	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	37	SGR SRA Run Selector	Laura Lee	Nov 14, 2016
GSE112423	Genome-wide maps of chromatin remodeling factors Isw2 and Ino80 in asynchronously growing yeast cells	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	8	SGR SRA Run Selector	Sam Cutler	Oct 30, 2018
GSE112424	Genome-wide maps of histone H3 in asynchronously growing yeast cells	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	16	SGR SRA Run Selector	Sam Cutler	Oct 30, 2018
GSE112425	Genome-wide maps of RNA Polymerase I and III in asynchronously growing yeast cells	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	8	SGR SRA Run Selector	Sam Cutler	Oct 30, 2018
GSE112426	Genome-wide maps of DNA Polymerase pausing in asynchronously growing yeast cells	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	16	SGR SRA Run Selector	Sam Cutler	Oct 30, 2018
GSE112427	Genome-wide maps of nucleosome positioning in asynchronously growing yeast cells	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	15	SGR SRA Run Selector	Sam Cutler	Oct 30, 2018
GSE112465	Isw2 and Ino80 chromatin remodeling factors regulate chromatin, replication, and copy number at the yeast ribosomal DNA locus	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	63	SGR	Sam Cutler	Oct 30, 2018
GSE114566	Condensin-dependent chromatin condensation represses transcription globally during quiescence [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	44	SGR SRA Run Selector	Sarah G. Swygert	Dec 27, 2018
GSE120606	Condensin-dependent chromatin condensation represses transcription globally during quiescence	Genome binding/occupancy profiling by high throughput sequencing Other	Saccharomyces cerevisiae	48	SGR TXT	Sarah G. Swygert	Dec 27, 2018